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The map label for this gene is nifH

Identifier: 15679556

GI number: 15679556

Start: 1426796

End: 1427695

Strand: Direct

Name: nifH

Synonym: MTH1560

Alternate gene names: 15679556

Gene position: 1426796-1427695 (Clockwise)

Preceding gene: 15679555

Following gene: 15679557

Centisome position: 81.47

GC content: 44.67

Gene sequence:

>900_bases
ATGTTTCAACAATTGAAAATTGTCGGAAGGCAGAAGCATACTTCCGGCAATGTTGAAGATGGTGAATGGTGCATGGTAAG
AAAAATCGCGATATATGGAAAGGGTGGAATCGGAAAATCCACAACACAGCAAAACACTGCAGCTGCAATGAGCTACTTCC
ATGGTAAAAATGTGATGATCCATGGATGTGACCCAAAGGCAGATAGCACACGCCTGATACTTGGAGGTAAAATGCAGACA
ACAATGATGGATACCCTCCGTGAACTTGGAGAGGTCGCATGTACACCGGATAAGGTTATTGAAACAGGCTTTGGGGGAAT
AAAATGTGTTGAATCAGGAGGTCCTGAACCCGGCGTAGGATGCGCTGGCAGGGGGGTCATAACTGCAATAACCCTCATGG
AAAGACATGGAGTCTATGAGAAGGACCTGGACTTTGTATTTTTTGATGTACTGGGTGACGTTGTGTGTGGGGGCTTTGCA
ATGCCTGTTAGGGATGGGAAAGCGGAAGAGATATACATAGTGGCATCTGGGGAGATGATGGCACTCTATGCAGCCAATAA
CATCTGTAAAGGGATGGTTAAATATGCCAGGCAGAGCGGAGTGCGTCTCGGGGGCATAATATGCAACAGCAGAAACGTTG
ATGGGGAGAAAGAGCTTCTTGAAGAATTCTGTGAAAGAATAGGTACACAGATGATACACTTTGTTCCAAGGGACAACATA
GTACAGAAGGCTGAATTCAACAAAAAATCGGTCATAGAATTCGATCCAGAGTGTAACCAGTCCCAGGAGTACAGGGAACT
CGCAAGGAAAATAATTGAAAACAAGGACTTCGTGATACCTGAACCAATGACAATGGATGAAATGGAGGAACTCGTTGTAA
AATACGGAGTTATGGATTAG

Upstream 100 bases:

>100_bases
CCTAAATAAATTCTATTTTTCCCATTTTCTTCTCATGAAAACTGTTCAGTTTTTGCTTTTTTGTTCTTTATTTTAACCAT
TTACCAAAAAATTTAAATAG

Downstream 100 bases:

>100_bases
GTGTTAAAGATGAAGATGATAAGGGCCATAATAAGACCAGAGAAGTCTGAAGAGGTGATTGATGCCCTCGATAAAGCTGG
ATTTCCAGCCCTAACAAAAA

Product: nitrogenase reductase

Products: NA

Alternate protein names: Nitrogenase Fe protein 1; Nitrogenase component II; Nitrogenase reductase [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFQQLKIVGRQKHTSGNVEDGEWCMVRKIAIYGKGGIGKSTTQQNTAAAMSYFHGKNVMIHGCDPKADSTRLILGGKMQT
TMMDTLRELGEVACTPDKVIETGFGGIKCVESGGPEPGVGCAGRGVITAITLMERHGVYEKDLDFVFFDVLGDVVCGGFA
MPVRDGKAEEIYIVASGEMMALYAANNICKGMVKYARQSGVRLGGIICNSRNVDGEKELLEEFCERIGTQMIHFVPRDNI
VQKAEFNKKSVIEFDPECNQSQEYRELARKIIENKDFVIPEPMTMDEMEELVVKYGVMD

Sequences:

>Translated_299_residues
MFQQLKIVGRQKHTSGNVEDGEWCMVRKIAIYGKGGIGKSTTQQNTAAAMSYFHGKNVMIHGCDPKADSTRLILGGKMQT
TMMDTLRELGEVACTPDKVIETGFGGIKCVESGGPEPGVGCAGRGVITAITLMERHGVYEKDLDFVFFDVLGDVVCGGFA
MPVRDGKAEEIYIVASGEMMALYAANNICKGMVKYARQSGVRLGGIICNSRNVDGEKELLEEFCERIGTQMIHFVPRDNI
VQKAEFNKKSVIEFDPECNQSQEYRELARKIIENKDFVIPEPMTMDEMEELVVKYGVMD
>Mature_299_residues
MFQQLKIVGRQKHTSGNVEDGEWCMVRKIAIYGKGGIGKSTTQQNTAAAMSYFHGKNVMIHGCDPKADSTRLILGGKMQT
TMMDTLRELGEVACTPDKVIETGFGGIKCVESGGPEPGVGCAGRGVITAITLMERHGVYEKDLDFVFFDVLGDVVCGGFA
MPVRDGKAEEIYIVASGEMMALYAANNICKGMVKYARQSGVRLGGIICNSRNVDGEKELLEEFCERIGTQMIHFVPRDNI
VQKAEFNKKSVIEFDPECNQSQEYRELARKIIENKDFVIPEPMTMDEMEELVVKYGVMD

Specific function: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components:the iron protein and the molybdenum-iron protein [H]

COG id: COG1348

COG function: function code P; Nitrogenase subunit NifH (ATPase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NifH/BchL/ChlL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000392
- InterPro:   IPR005977 [H]

Pfam domain/function: PF00142 Fer4_NifH [H]

EC number: =1.18.6.1 [H]

Molecular weight: Translated: 33054; Mature: 33054

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQQLKIVGRQKHTSGNVEDGEWCMVRKIAIYGKGGIGKSTTQQNTAAAMSYFHGKNVMI
CCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEE
HGCDPKADSTRLILGGKMQTTMMDTLRELGEVACTPDKVIETGFGGIKCVESGGPEPGVG
ECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCC
CAGRGVITAITLMERHGVYEKDLDFVFFDVLGDVVCGGFAMPVRDGKAEEIYIVASGEMM
CCCCHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEE
ALYAANNICKGMVKYARQSGVRLGGIICNSRNVDGEKELLEEFCERIGTQMIHFVPRDNI
EEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCC
VQKAEFNKKSVIEFDPECNQSQEYRELARKIIENKDFVIPEPMTMDEMEELVVKYGVMD
HHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFQQLKIVGRQKHTSGNVEDGEWCMVRKIAIYGKGGIGKSTTQQNTAAAMSYFHGKNVMI
CCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEE
HGCDPKADSTRLILGGKMQTTMMDTLRELGEVACTPDKVIETGFGGIKCVESGGPEPGVG
ECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCC
CAGRGVITAITLMERHGVYEKDLDFVFFDVLGDVVCGGFAMPVRDGKAEEIYIVASGEMM
CCCCHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEE
ALYAANNICKGMVKYARQSGVRLGGIICNSRNVDGEKELLEEFCERIGTQMIHFVPRDNI
EEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCC
VQKAEFNKKSVIEFDPECNQSQEYRELARKIIENKDFVIPEPMTMDEMEELVVKYGVMD
HHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]