Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15679451

GI number: 15679451

Start: 1315185

End: 1315928

Strand: Direct

Name: Not Available

Synonym: MTH1454

Alternate gene names: 15679451

Gene position: 1315185-1315928 (Clockwise)

Preceding gene: 15679448

Following gene: 15679452

Centisome position: 75.09

GC content: 52.28

Gene sequence:

>744_bases
GTGTTTATGGATAGAGGTGTTAATGAAGCCCTGAAGATCATGGGTCTGACAGATTATCAGGCCTCAGCCTACACTGCAAT
GGTCACGCTGGTATCTGCCAGGGCAGTGGAGGTTGCCGAGGTCTCGGGCATTCCAAGATCAAGGGTCTATGAGGTCCTGA
GGCAGCTCTCAGACAGGGGCTTCGTGGAGGTTGAGAGGGGTAAACCCATGAGGTACCATGTGGTGCCACCCTCAGAGGTG
TTCAGGAGGGAGAAGGGTAGGATCATCAAAAAACTTGATGAGGCCATGTCCAGGCTTACCGAAATCTATGAGGACAGGGT
TGCCAGGGTACCGACACCTGTATGGCTCATCCATGGACAGGAGAAGATTGTGAAGAAGGAACTGGAGATAATATCCCGTT
CAAGGAAGGAACTCAAGATGAGGATGGGCTTCATATTCAGGGATGAAATAAAGGCACTCCGCCCGGCCCTTGATAGAATA
ACCGATCGTGGAGTTGAGGTGAGGATCATGGCCAGGGATGTAATTGATGTACCCGGTGAGGTTGAGGTGAGGAGAATACC
CCCTGTCAGGATGCTTGTCCGGGATTCACAGGAGATGATGTGGATATTCTCACGCTTCACACCCGATGGTGCACCCATCC
CTGAAACCGCCATCGGGATATGGAACCAGTACCCTGAGATCGCAGAGAACTATGCCAGGATATTCGACACGGTATGGAAG
GGGGGTGCCGGGAGGTCACCTTAA

Upstream 100 bases:

>100_bases
TAAAAACTGGCAGTAAATTATATATAATTTTTGTCACTATTTCAGTATAAAATGTAACAGATAGATGGGGAGGGGACTCC
AGGGATATAACGAGTGAGGT

Downstream 100 bases:

>100_bases
GATCCTTTCAATCGCAGAGACAGGACATTTCCATTTCAATCAGCACAGAATGTACCTCATTGAAGAGGTTCAGGAGATCC
CTTAAGGGTCATCATCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MFMDRGVNEALKIMGLTDYQASAYTAMVTLVSARAVEVAEVSGIPRSRVYEVLRQLSDRGFVEVERGKPMRYHVVPPSEV
FRREKGRIIKKLDEAMSRLTEIYEDRVARVPTPVWLIHGQEKIVKKELEIISRSRKELKMRMGFIFRDEIKALRPALDRI
TDRGVEVRIMARDVIDVPGEVEVRRIPPVRMLVRDSQEMMWIFSRFTPDGAPIPETAIGIWNQYPEIAENYARIFDTVWK
GGAGRSP

Sequences:

>Translated_247_residues
MFMDRGVNEALKIMGLTDYQASAYTAMVTLVSARAVEVAEVSGIPRSRVYEVLRQLSDRGFVEVERGKPMRYHVVPPSEV
FRREKGRIIKKLDEAMSRLTEIYEDRVARVPTPVWLIHGQEKIVKKELEIISRSRKELKMRMGFIFRDEIKALRPALDRI
TDRGVEVRIMARDVIDVPGEVEVRRIPPVRMLVRDSQEMMWIFSRFTPDGAPIPETAIGIWNQYPEIAENYARIFDTVWK
GGAGRSP
>Mature_247_residues
MFMDRGVNEALKIMGLTDYQASAYTAMVTLVSARAVEVAEVSGIPRSRVYEVLRQLSDRGFVEVERGKPMRYHVVPPSEV
FRREKGRIIKKLDEAMSRLTEIYEDRVARVPTPVWLIHGQEKIVKKELEIISRSRKELKMRMGFIFRDEIKALRPALDRI
TDRGVEVRIMARDVIDVPGEVEVRRIPPVRMLVRDSQEMMWIFSRFTPDGAPIPETAIGIWNQYPEIAENYARIFDTVWK
GGAGRSP

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 28505; Mature: 28505

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMDRGVNEALKIMGLTDYQASAYTAMVTLVSARAVEVAEVSGIPRSRVYEVLRQLSDRG
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
FVEVERGKPMRYHVVPPSEVFRREKGRIIKKLDEAMSRLTEIYEDRVARVPTPVWLIHGQ
CEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
EKIVKKELEIISRSRKELKMRMGFIFRDEIKALRPALDRITDRGVEVRIMARDVIDVPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC
VEVRRIPPVRMLVRDSQEMMWIFSRFTPDGAPIPETAIGIWNQYPEIAENYARIFDTVWK
EEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
GGAGRSP
CCCCCCC
>Mature Secondary Structure
MFMDRGVNEALKIMGLTDYQASAYTAMVTLVSARAVEVAEVSGIPRSRVYEVLRQLSDRG
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
FVEVERGKPMRYHVVPPSEVFRREKGRIIKKLDEAMSRLTEIYEDRVARVPTPVWLIHGQ
CEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
EKIVKKELEIISRSRKELKMRMGFIFRDEIKALRPALDRITDRGVEVRIMARDVIDVPGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC
VEVRRIPPVRMLVRDSQEMMWIFSRFTPDGAPIPETAIGIWNQYPEIAENYARIFDTVWK
EEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
GGAGRSP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]