| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679452
GI number: 15679452
Start: 1316121
End: 1317938
Strand: Direct
Name: Not Available
Synonym: MTH1455
Alternate gene names: 15679452
Gene position: 1316121-1317938 (Clockwise)
Preceding gene: 15679451
Following gene: 15679453
Centisome position: 75.15
GC content: 50.22
Gene sequence:
>1818_bases ATGAGGATACTGTTAATTCACTCTGATTACTTGAAATACGAGACAAAGAATAAAACAGGGATAGCAGAGGAAATCCCTGA AGATAAGATGCAGGGAGATTTCAGGGAGTCCCTGGTGGTTTTCACAGCAGTGGAGGCTGAAGATGAGGATAACCCTGAAT CAGTAATTGAAAACGCGGTTAATGAAATAATAAAGGTTTTCAATGACGTTAAGGCAGAGAACGTCGTGATATACCCTTAC GCACACCTCAGCTCCTCGCTCAGCTCCCCCAAAACAGCGGTGGAGGTCCTTGAGGGAATGGAATCAGCCCTCCGCAGCGA GGGTGTTGATGTCTCAAGGGTTCCTTTCGGGTGGTATAAGGCCTTCAAGATATCCTGCAAGGGTCACCCACTATCAGAGC TATCAAGGAGCATAAGGCCACAGCCCCCAAAGGTGGAGGAGGAGAGCGAGGAATCCGAGTGGTTCATACTCCACAGGGGA GAGACGGTTAAACCCGGAGACTTCGAGTTCAAAAACAGGGATCTTGAGAACCTGGTGAAATATGAGCTTGGCGAACTTGA ATCCTCTGGTGAAGAACCACCACACGTTAGACTCATGAGGGAGAAGGGACTTGCAGACTATGAGCCATCAGCAGACGTTG GACACCTCCGGTGGTACCCCAGGGGAAGGCTGATAAGGGACCTTCTTGCAGACTACGTCTACATGCTTGTCACCAGTGAG GGGGCAATGCCAGTTGAGACACCCATAATGTATGACCTCGAGGACGAGGCAATCAGGGTACATGCAGAGAAGTTCGGTGA AAGACAGTACAGGATGAAGAACAGGAAGGAACTCATGCTGAGATACGCCTGCTGTTTCGGAGCCTTCAGGATCCTTTCAG ACTCCTTCCTGACGTGGAAGAACCTGCCTGCATCCATATATGAACTCTCGACCTACAGCTTCCGGCTTGAAAAGAAGGGC GAGGTGGTTGGTCTTAAGAGGCTCAGGGGCTTTACAATGCCGGATCTCCACACGGTATGTGCTGACCTTGATCAGTCCCT TGAGGAATTCGCCAGGCAGGTCGAGATGTGCATGAGGACCGGCCAGGACCTCCAGGTGAACTATGAGGTCATATTCAGGG CCACGGCTGACTTCTATGAGGAGTACAGGGAATGGGTACATGAAGTAGCGGATAAAATCGGAAAACCAGTGCTCCTGGAG ATACTCCCCTCAAGGAAGCACTACTGGATTGCCAAGATGGACTTCGCAGCCATAGACTACCTTGGAAGACCGATAGAGAA TCCAACAGTTCAGATTGACGTTGAAAGCGGTGAGAGGTTCGGGATAACCTATGTTAACAGTGATGAGGAGGAGGTAAACC CAATAATCCTCCACTGCAGTCCAACAGGCAGCATTGAGAGGGTCATATGCAGCCTTCTTGAGAAGACGGCCATTGAAATG GATGAAAAACCACCTATGCTGCCCTTGTGGCTCTCACCCACCCAGGTACGTGTGCTTCCAATTGCAGAGCGCCACATGGA ATATGCCAGTGACCTGGTATCAGAACTTATCGCAGCTGACGTAAGGGCTGACCTGGATGACCGATCAGAGACCCTCGGAA AGAAGATAAGGAATGCGGCCCAGGACTGGGTCCCCTACGTTGTTGTTATAGGTGACAGTGAAATGGAGGGCAAACTCACG GTCAATGTGAGGGAAACAGGTGAAAAGCTTCAGATGGGCCTGGATGAACTCATAGAACGTATAAGGGCTGAAACAGAGGG CATGCCCTTCAGAAGACTGCCGCTACCGGTTAAACTATCCGAGAGGATAAACTTCTAA
Upstream 100 bases:
>100_bases CATCTGAACATTACTAGGGGTTTAAAGATCCACCGGAGCAATATTTAAAAACCCTCACCTTAAAAACAATAACATTAGTT ATTCTTACCAAGGTGATGGC
Downstream 100 bases:
>100_bases TAATTTTTTTTAATCTGATAACTTATAACTTATCACATATACTTTATAAGTTATAAATTATAACTTAGATCCAGCAGGTG ATGAGATGGGAGAGGTAATT
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAVNEIIKVFNDVKAENVVIYPY AHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYKAFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRG ETVKPGDFEFKNRDLENLVKYELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSE GAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKG EVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLE ILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEM DEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLT VNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLSERINF
Sequences:
>Translated_605_residues MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAVNEIIKVFNDVKAENVVIYPY AHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYKAFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRG ETVKPGDFEFKNRDLENLVKYELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSE GAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKG EVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLE ILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEM DEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLT VNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLSERINF >Mature_605_residues MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAVNEIIKVFNDVKAENVVIYPY AHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYKAFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRG ETVKPGDFEFKNRDLENLVKYELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSE GAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKG EVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLE ILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEM DEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLT VNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLSERINF
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI38570111, Length=371, Percent_Identity=26.1455525606469, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI38202255, Length=384, Percent_Identity=25.78125, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI20070344, Length=415, Percent_Identity=24.578313253012, Blast_Score=106, Evalue=8e-23, Organism=Escherichia coli, GI1788013, Length=402, Percent_Identity=26.1194029850746, Blast_Score=129, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71984184, Length=419, Percent_Identity=25.0596658711217, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71984192, Length=419, Percent_Identity=25.0596658711217, Blast_Score=125, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6322654, Length=403, Percent_Identity=24.5657568238213, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322112, Length=393, Percent_Identity=24.4274809160305, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24583839, Length=412, Percent_Identity=26.4563106796117, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24583842, Length=412, Percent_Identity=26.4563106796117, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI28574141, Length=412, Percent_Identity=26.4563106796117, Blast_Score=133, Evalue=3e-31,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYT_METTH (O27504)
Other databases:
- EMBL: AE000666 - PIR: G69060 - RefSeq: NP_276569.1 - ProteinModelPortal: O27504 - SMR: O27504 - STRING: O27504 - GeneID: 1471724 - GenomeReviews: AE000666_GR - KEGG: mth:MTH1455 - NMPDR: fig|187420.1.peg.1424 - eggNOG: arNOG04477 - HOGENOM: HBG392335 - OMA: ETPVMYD - ProtClustDB: PRK03991 - BioCyc: MTHE187420:MTH1455-MONOMER - BRENDA: 6.1.1.3 - GO: GO:0005737 - HAMAP: MF_00184_A - InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR015011 - Gene3D: G3DSA:3.40.50.800 - PRINTS: PR01047 - ProDom: PD016189 - TIGRFAMs: TIGR00418
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF08915 tRNA-Thr_ED; SSF52954 Anticodon_bd
EC number: =6.1.1.3
Molecular weight: Translated: 69540; Mature: 69540
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAV CEEEEEECHHHEEECCCCCCCHHHCCCHHHCCHHHHCEEEEEEEECCCCCCHHHHHHHHH NEIIKVFNDVKAENVVIYPYAHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYK HHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCEEE AFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRGETVKPGDFEFKNRDLENLVK EEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH YELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSE HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC GAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWK CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC NLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRT CCCCHHEECCCEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKHYWIAKMDFAAIDY CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEHHHHHHH LGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEM HCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC DEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAA CCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QDWVPYVVVIGDSEMEGKLTVNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLS HCCCCEEEEECCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHH ERINF CCCCC >Mature Secondary Structure MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAV CEEEEEECHHHEEECCCCCCCHHHCCCHHHCCHHHHCEEEEEEEECCCCCCHHHHHHHHH NEIIKVFNDVKAENVVIYPYAHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYK HHHHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCEEE AFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRGETVKPGDFEFKNRDLENLVK EEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH YELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSE HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC GAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWK CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC NLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRT CCCCHHEECCCEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKHYWIAKMDFAAIDY CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEHHHHHHH LGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEM HCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC DEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAA CCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QDWVPYVVVIGDSEMEGKLTVNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLS HCCCCEEEEECCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHH ERINF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463