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Identifier: 15679351

GI number: 15679351

Start: 1217210

End: 1217743

Strand: Direct

Name: Not Available

Synonym: MTH1352

Alternate gene names: 15679351

Gene position: 1217210-1217743 (Clockwise)

Preceding gene: 15679350

Following gene: 15679354

Centisome position: 69.5

GC content: 51.12

Gene sequence:

>534_bases
ATGAAGATCTGCAGAATATGCGGCTATCAGATCCCAGAAGGTGAATTCAACCTGCTGGAGGATGGCTGGGTGTGTCCCCG
GTGTGGTGTTGGGAAGGAGGAACTCCAGGATTCCGCCGAGCCCCTGGGGGGTCGGGACCCCCTCATGCTTATTTTCAGGG
CCATGACTGTGGGGCTCTGGAGGGTTCTGGGTAATGGATCCCAGGGAGTTACAAGGGAGATGGGGTCTGTGATTGCAGAC
AACATCAGGCACGGGGATGATCCCCTGAAATCAGCCGCAGACTACTTCATCGAACATGGATTTGCAGCGTCCATCAGCAC
AGACACTGAAAACTTTGCCCTCAATGTTAAAAACTGCAGTTTCTATGGATTCTGTTGTTCACTGGAGGAGGATGGGGTGC
TTTTATCAACCTGCCCCTATGCAAACACGGCCGCTGCAGTCCTTGAAAGGACCACGGGATACAGGTACCGTATAAAACGA
AATAAGGGGGACCATGGACACATCATTGAATTTTCACGGATATCAAAAAAATAG

Upstream 100 bases:

>100_bases
TTGATGAGGCCCATGACTTCTTTGATGAGAGCTCAAGGGACGAGGGAAGGCATGCTGCCATGCTGAGGGGACTCCTCCAG
AGGTACTTCCAGGGATAACC

Downstream 100 bases:

>100_bases
GTAGGGTTCCGAGATTAACTTCACAACGGTGCCACCGAAGCCCCTCTGATTCAGAAATCAGCATAGGGTCTCTCCATACC
CGCACGCTTCAGTATATCCT

Product: rubredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKICRICGYQIPEGEFNLLEDGWVCPRCGVGKEELQDSAEPLGGRDPLMLIFRAMTVGLWRVLGNGSQGVTREMGSVIAD
NIRHGDDPLKSAADYFIEHGFAASISTDTENFALNVKNCSFYGFCCSLEEDGVLLSTCPYANTAAAVLERTTGYRYRIKR
NKGDHGHIIEFSRISKK

Sequences:

>Translated_177_residues
MKICRICGYQIPEGEFNLLEDGWVCPRCGVGKEELQDSAEPLGGRDPLMLIFRAMTVGLWRVLGNGSQGVTREMGSVIAD
NIRHGDDPLKSAADYFIEHGFAASISTDTENFALNVKNCSFYGFCCSLEEDGVLLSTCPYANTAAAVLERTTGYRYRIKR
NKGDHGHIIEFSRISKK
>Mature_177_residues
MKICRICGYQIPEGEFNLLEDGWVCPRCGVGKEELQDSAEPLGGRDPLMLIFRAMTVGLWRVLGNGSQGVTREMGSVIAD
NIRHGDDPLKSAADYFIEHGFAASISTDTENFALNVKNCSFYGFCCSLEEDGVLLSTCPYANTAAAVLERTTGYRYRIKR
NKGDHGHIIEFSRISKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUBH_METTH (Q50533)

Other databases:

- EMBL:   U21086
- EMBL:   AE000666
- PIR:   G69046
- RefSeq:   NP_276468.1
- ProteinModelPortal:   Q50533
- SMR:   Q50533
- STRING:   Q50533
- GeneID:   1471069
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1352
- NMPDR:   fig|187420.1.peg.1323
- ProtClustDB:   CLSK2750555
- BioCyc:   MTHE187420:MTH1352-MONOMER
- GO:   GO:0006810
- InterPro:   IPR004039
- InterPro:   IPR018527
- Gene3D:   G3DSA:2.20.28.10

Pfam domain/function: PF00301 Rubredoxin

EC number: NA

Molecular weight: Translated: 19592; Mature: 19592

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00202 RUBREDOXIN; PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICRICGYQIPEGEFNLLEDGWVCPRCGVGKEELQDSAEPLGGRDPLMLIFRAMTVGLW
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RVLGNGSQGVTREMGSVIADNIRHGDDPLKSAADYFIEHGFAASISTDTENFALNVKNCS
HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCE
FYGFCCSLEEDGVLLSTCPYANTAAAVLERTTGYRYRIKRNKGDHGHIIEFSRISKK
EEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEHHCCCCC
>Mature Secondary Structure
MKICRICGYQIPEGEFNLLEDGWVCPRCGVGKEELQDSAEPLGGRDPLMLIFRAMTVGLW
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RVLGNGSQGVTREMGSVIADNIRHGDDPLKSAADYFIEHGFAASISTDTENFALNVKNCS
HHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCE
FYGFCCSLEEDGVLLSTCPYANTAAAVLERTTGYRYRIKRNKGDHGHIIEFSRISKK
EEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7649162; 9371463