| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15679269
GI number: 15679269
Start: 1149346
End: 1151049
Strand: Direct
Name: Not Available
Synonym: MTH1258
Alternate gene names: 15679269
Gene position: 1149346-1151049 (Clockwise)
Preceding gene: 15679268
Following gene: 15679274
Centisome position: 65.63
GC content: 49.06
Gene sequence:
>1704_bases GTGACGCTGGCCCTTGGTGGTGTGGGGCTGATTGCATACGTTTTCAGCTTAACAGTTTCGGTGGTTACAATGACCCTGCA GGATACCATATCAGGCGCCCGGATACGCAGGTTGATGCAGTCAATGAACAACCACTTCATTCTCTGTGGTTTTGGCCGTG TCGGATCTGCTGTTTTTAAGGAGCTCCAGAAAAGGAACCAGAAGAGCATAATAATTGAAAAGGACCGTGAAATAGTTGAA AAGGAACTATGGGATGATCCCAATGTCCTTGCGATACCCGAAAGCGCCGCAGATGAGGAGACTCTCAGGGCGGCCGGTAT AAAACGGGCCAGGGGGGTTATAATAACAACAGGCGACGACGTCGACAACCTCTTCATAACACTGACCTGCAGGGAGCTTA ACCCTGACATATGGATCGTGACAAGAGCAAGCAAGAGGGAAAACATCAAAAGGCTGTACCGTGCAGGGGCCAACCGGGTT ATCTCACCCGAAATCAGTGGGGGAGAGGATATTTACTTCGCAGCCATGGAACCAACAATGGTGAAGATAACCGTTAAGCA CGATGTTGACGACATTGGAAGGGAGGCCAGAATAATACTGAAACATGGCTGCACACTGGAGGACATAGAGTACCACCTCC CTGAATTCAAGGAGCCCCTGGTGAGGAAGATCGGTGTGTCTGATGGCGGGGAACTTGAAAGGTTCCTGAAGATCCTTGAG AGGGACCCGGCCAGGAAGAGTTCCCTTAAAAGGATCTATGAATCCGTCAGCGGCATACATTCCCATTGGATATCCGGGCC TGACAGGGAGAGCATAGACGCTGTTATCGATGAACTCAAATCAGAGGGGATACTGCTTGGTGTGAACCTCAATGATGAGG AGATAAAGGAGGTTGCAAGGAAACACGGCCGTCTCGTTGAAATAATAATAAAGCCTGAGATGAGCATAGTTGAAAACCAT GGGGTCGATGACATCAGGAGAGAGGCCGAGATCATAATAAACCATGGCTGCACCATTGAGGATATAGAGTACTATCTCCC GGGATTCTCAGAGCCCCTCAGAAGGAATGTTGGGGTTAGCTCCATGGAAGAAATCGACAGTTTCATGAAGACCCTCAAGA GTGAACCCCGTAAACTTGAATCCCTTGACAGGCTCTACACGCTTTCAGGTGGTGGAATACACTCCCACCGGATTTCAGGG CCCGACTCAAAGAGCCTTGAACTGGTTGAGAGAGAACTCAGGGAGGAGGGTTTCCTGATAGGGGTCAACCTGGAGCTCAG TGAAATCAAGTCAATAATACAGGAGTCAGGCCGTGTTGTTGAGATGCTGCTCAAACATGACCTTGGAAACATGGACGACA AGGAGATAATAATCCGGCGGGGCGGGCGTATCCTTGACTCAAAGCACTACCTCCCCGGAGTCAAGCAGGTCGTCACACGA AACCTCAACATCAGGAACATGGATGATCTAAAGAGGTGCATGGAGGAACTGGAAAACCCTGATGCCCGAAGGTCACTCAA GGCCCTCTACAGTATATCCCGGAATATACACTCCCACACAGTGGCTGCAGCCGACATTAAGATTATAATGAAAATTGAAG ATGACCTCAGGAAAAGGGGTATACTCCTCGGTGTTAACCTCCGCGAGGACGAGATATGGGAAATAGTTGAAAGCGAAATG ATGGAAAAATTCTGCATAGAATAA
Upstream 100 bases:
>100_bases GCCTTGACTTCTACAACGCAGTCTACTTCACCATTATAACCATTGCAACCGTGGTTACGGGGATATAATCCCTGTTAACA TACCCCAGAAGATATTCTCC
Downstream 100 bases:
>100_bases AAAAAGGTCAACCCTGATAGGATCAGGGCATGGATAAAAAAATCAGAAGAGGTCATGGAGTTTTATCTTGTAGGCTCCCA GGTTACCGCCATAGTTTCCT
Product: potassium channel related protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MTLALGGVGLIAYVFSLTVSVVTMTLQDTISGARIRRLMQSMNNHFILCGFGRVGSAVFKELQKRNQKSIIIEKDREIVE KELWDDPNVLAIPESAADEETLRAAGIKRARGVIITTGDDVDNLFITLTCRELNPDIWIVTRASKRENIKRLYRAGANRV ISPEISGGEDIYFAAMEPTMVKITVKHDVDDIGREARIILKHGCTLEDIEYHLPEFKEPLVRKIGVSDGGELERFLKILE RDPARKSSLKRIYESVSGIHSHWISGPDRESIDAVIDELKSEGILLGVNLNDEEIKEVARKHGRLVEIIIKPEMSIVENH GVDDIRREAEIIINHGCTIEDIEYYLPGFSEPLRRNVGVSSMEEIDSFMKTLKSEPRKLESLDRLYTLSGGGIHSHRISG PDSKSLELVERELREEGFLIGVNLELSEIKSIIQESGRVVEMLLKHDLGNMDDKEIIIRRGGRILDSKHYLPGVKQVVTR NLNIRNMDDLKRCMEELENPDARRSLKALYSISRNIHSHTVAAADIKIIMKIEDDLRKRGILLGVNLREDEIWEIVESEM MEKFCIE
Sequences:
>Translated_567_residues MTLALGGVGLIAYVFSLTVSVVTMTLQDTISGARIRRLMQSMNNHFILCGFGRVGSAVFKELQKRNQKSIIIEKDREIVE KELWDDPNVLAIPESAADEETLRAAGIKRARGVIITTGDDVDNLFITLTCRELNPDIWIVTRASKRENIKRLYRAGANRV ISPEISGGEDIYFAAMEPTMVKITVKHDVDDIGREARIILKHGCTLEDIEYHLPEFKEPLVRKIGVSDGGELERFLKILE RDPARKSSLKRIYESVSGIHSHWISGPDRESIDAVIDELKSEGILLGVNLNDEEIKEVARKHGRLVEIIIKPEMSIVENH GVDDIRREAEIIINHGCTIEDIEYYLPGFSEPLRRNVGVSSMEEIDSFMKTLKSEPRKLESLDRLYTLSGGGIHSHRISG PDSKSLELVERELREEGFLIGVNLELSEIKSIIQESGRVVEMLLKHDLGNMDDKEIIIRRGGRILDSKHYLPGVKQVVTR NLNIRNMDDLKRCMEELENPDARRSLKALYSISRNIHSHTVAAADIKIIMKIEDDLRKRGILLGVNLREDEIWEIVESEM MEKFCIE >Mature_566_residues TLALGGVGLIAYVFSLTVSVVTMTLQDTISGARIRRLMQSMNNHFILCGFGRVGSAVFKELQKRNQKSIIIEKDREIVEK ELWDDPNVLAIPESAADEETLRAAGIKRARGVIITTGDDVDNLFITLTCRELNPDIWIVTRASKRENIKRLYRAGANRVI SPEISGGEDIYFAAMEPTMVKITVKHDVDDIGREARIILKHGCTLEDIEYHLPEFKEPLVRKIGVSDGGELERFLKILER DPARKSSLKRIYESVSGIHSHWISGPDRESIDAVIDELKSEGILLGVNLNDEEIKEVARKHGRLVEIIIKPEMSIVENHG VDDIRREAEIIINHGCTIEDIEYYLPGFSEPLRRNVGVSSMEEIDSFMKTLKSEPRKLESLDRLYTLSGGGIHSHRISGP DSKSLELVERELREEGFLIGVNLELSEIKSIIQESGRVVEMLLKHDLGNMDDKEIIIRRGGRILDSKHYLPGVKQVVTRN LNIRNMDDLKRCMEELENPDARRSLKALYSISRNIHSHTVAAADIKIIMKIEDDLRKRGILLGVNLREDEIWEIVESEMM EKFCIE
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1827
COG function: function code R; Predicted small molecule binding protein (contains 3H domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=167, Percent_Identity=28.1437125748503, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 64327; Mature: 64196
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLALGGVGLIAYVFSLTVSVVTMTLQDTISGARIRRLMQSMNNHFILCGFGRVGSAVFK CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH ELQKRNQKSIIIEKDREIVEKELWDDPNVLAIPESAADEETLRAAGIKRARGVIITTGDD HHHHCCCCCEEEECHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCEEEEECCCC VDNLFITLTCRELNPDIWIVTRASKRENIKRLYRAGANRVISPEISGGEDIYFAAMEPTM CCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCEE VKITVKHDVDDIGREARIILKHGCTLEDIEYHLPEFKEPLVRKIGVSDGGELERFLKILE EEEEEECCHHHCCCHHEEHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH RDPARKSSLKRIYESVSGIHSHWISGPDRESIDAVIDELKSEGILLGVNLNDEEIKEVAR CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH KHGRLVEIIIKPEMSIVENHGVDDIRREAEIIINHGCTIEDIEYYLPGFSEPLRRNVGVS HCCCEEEEEECCCHHHHHCCCHHHHHHHHHEEEECCCCHHHHHHHCCCCCHHHHHCCCCC SMEEIDSFMKTLKSEPRKLESLDRLYTLSGGGIHSHRISGPDSKSLELVERELREEGFLI HHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHHHCCEEE GVNLELSEIKSIIQESGRVVEMLLKHDLGNMDDKEIIIRRGGRILDSKHYLPGVKQVVTR EECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEECCCCCCCHHHHHHHC NLNIRNMDDLKRCMEELENPDARRSLKALYSISRNIHSHTVAAADIKIIMKIEDDLRKRG CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEHHHHHHCC ILLGVNLREDEIWEIVESEMMEKFCIE EEEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLALGGVGLIAYVFSLTVSVVTMTLQDTISGARIRRLMQSMNNHFILCGFGRVGSAVFK EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH ELQKRNQKSIIIEKDREIVEKELWDDPNVLAIPESAADEETLRAAGIKRARGVIITTGDD HHHHCCCCCEEEECHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCEEEEECCCC VDNLFITLTCRELNPDIWIVTRASKRENIKRLYRAGANRVISPEISGGEDIYFAAMEPTM CCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCEE VKITVKHDVDDIGREARIILKHGCTLEDIEYHLPEFKEPLVRKIGVSDGGELERFLKILE EEEEEECCHHHCCCHHEEHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH RDPARKSSLKRIYESVSGIHSHWISGPDRESIDAVIDELKSEGILLGVNLNDEEIKEVAR CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH KHGRLVEIIIKPEMSIVENHGVDDIRREAEIIINHGCTIEDIEYYLPGFSEPLRRNVGVS HCCCEEEEEECCCHHHHHCCCHHHHHHHHHEEEECCCCHHHHHHHCCCCCHHHHHCCCCC SMEEIDSFMKTLKSEPRKLESLDRLYTLSGGGIHSHRISGPDSKSLELVERELREEGFLI HHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHHHCCEEE GVNLELSEIKSIIQESGRVVEMLLKHDLGNMDDKEIIIRRGGRILDSKHYLPGVKQVVTR EECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEECCCCCCCHHHHHHHC NLNIRNMDDLKRCMEELENPDARRSLKALYSISRNIHSHTVAAADIKIIMKIEDDLRKRG CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEHHHHHHCC ILLGVNLREDEIWEIVESEMMEKFCIE EEEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]