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Identifier: 15679274

GI number: 15679274

Start: 1155242

End: 1155463

Strand: Direct

Name: Not Available

Synonym: MTH1263

Alternate gene names: NA

Gene position: 1155242-1155463 (Clockwise)

Preceding gene: 15679269

Following gene: 15679275

Centisome position: 65.96

GC content: 44.59

Gene sequence:

>222_bases
TTGTTTGGAGATAACTACTATAGAAAGGAAACATACTCCACACCGGTGAATGTGGGTGAGGAGTACGAAGTTAAAATTGA
AGACCTTGGCAGAGATGGTGATGGAATAGCCCGTGTCGAAGGTTTTGTTGTTTTTGTACCTGGTGCAGGTGTAGGCGACG
AGGTCAAGATAAGGATAAGTGCAACCAGGCGCAAGTTTGCTTTCGCTGAAGTTGTAGAATAG

Upstream 100 bases:

>100_bases
ATGCATGATGGTCATTTGATTATTCTTACTGATTCTCGTTTGAATTTGGTTTGAATTAATTGCATGATTCTTGTGTGTCC
CTACTTAAGGATGTGATGAA

Downstream 100 bases:

>100_bases
ATTAGGTTATGTATTTCTGGAGTAGACTCTTCTACTCATCGAAATTTATTTTTTGGTTCAGGTTCAGCGGTAGGATGAAG
GTCCGCTGTTAAGCTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MFGDNYYRKETYSTPVNVGEEYEVKIEDLGRDGDGIARVEGFVVFVPGAGVGDEVKIRISATRRKFAFAEVVE

Sequences:

>Translated_73_residues
MFGDNYYRKETYSTPVNVGEEYEVKIEDLGRDGDGIARVEGFVVFVPGAGVGDEVKIRISATRRKFAFAEVVE
>Mature_73_residues
MFGDNYYRKETYSTPVNVGEEYEVKIEDLGRDGDGIARVEGFVVFVPGAGVGDEVKIRISATRRKFAFAEVVE

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01938 TRAM [H]

EC number: NA

Molecular weight: Translated: 8150; Mature: 8150

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGDNYYRKETYSTPVNVGEEYEVKIEDLGRDGDGIARVEGFVVFVPGAGVGDEVKIRIS
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEEE
ATRRKFAFAEVVE
CCCCEEEEEECCC
>Mature Secondary Structure
MFGDNYYRKETYSTPVNVGEEYEVKIEDLGRDGDGIARVEGFVVFVPGAGVGDEVKIRIS
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEEE
ATRRKFAFAEVVE
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]