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Identifier: 15679160

GI number: 15679160

Start: 1060005

End: 1060760

Strand: Direct

Name: Not Available

Synonym: MTH1149

Alternate gene names: 15679160

Gene position: 1060005-1060760 (Clockwise)

Preceding gene: 15679159

Following gene: 15679161

Centisome position: 60.52

GC content: 50.0

Gene sequence:

>756_bases
CTGCTTCTTGAAATAACCGACCTTGCGGTTGAGGTTAGCGGAAAACAGGTCCTCAAGGACATAGACCTCTACATCGATAG
GGGAGAGACACATGTCCTTCTCGGACCCAACGGTTCAGGTAAGAGCACCCTCTTCATGACGATTCTGGGTTTTCCAAAGT
ACAGGGTTACAAATGGTCAGATAATCTTCAAGGGTGAGGATATAACCGATCTGAGCACAACAGAGCGTGTGAGGATGGGT
ATAGGTGTCAGCTTCCAGAACCCCCCAGCAATAAGGGGTGTGAAGCTCATGGACCTCCTCAAGGTTGAATCTGGTCTGGA
AACAGAGGACGAACTGACACCCGAGCTGCGGGGACTTGCAGCCAAGATGAAGTTCGATGAGAGCTTCCTTGAGAGGGATG
TGAACCTTGGATTCTCAGGTGGTGAGGTTAAGAGATCCGAGATCCTCCAGTTACTGGCCCAGAAACCTGACTTCATAATG
TTCGATGAACCGGATTCCGGTGTTGACATTGAGAATGTGGAGCTCCTGGCGGAGGAGATCAACGTGCTCCTTGACAAGGA
CAAGAAACCTGGTCTGAGGAAGAAGGCAGGGCTCCTAATAACCCACCTGGGATACATACTGAACTTTGTAAGCGCCGATA
CCGCCCATGTGCTCATGGATGGCAGGATAGCATGTTCAGGGAATCCACAGGAGATAATTGAGGATATAAGGAAGGATGGA
TTCAAGGGGTGTGTTGAATGCTGCGGGATACACTGA

Upstream 100 bases:

>100_bases
TGAACTCCTTGAATCCTTCCTAGAATAGGATTGGCATAGGAATCTATTTATTGTATCCTACGAATAATTTATTAAAAGGA
AGAAATAGGTGGTGGTTTAA

Downstream 100 bases:

>100_bases
AGAAGGCTGAGAAGGCCAGGGAAAAGAAGGCCCTCTACGGTGAGGACATCGACCTTGAAAAATTCATAAAGGAGGAAGCC
GGTGAACACGAGGAGGTGAC

Product: ABC transporter subunit Ycf16

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQIIFKGEDITDLSTTERVRMG
IGVSFQNPPAIRGVKLMDLLKVESGLETEDELTPELRGLAAKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIM
FDEPDSGVDIENVELLAEEINVLLDKDKKPGLRKKAGLLITHLGYILNFVSADTAHVLMDGRIACSGNPQEIIEDIRKDG
FKGCVECCGIH

Sequences:

>Translated_251_residues
MLLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQIIFKGEDITDLSTTERVRMG
IGVSFQNPPAIRGVKLMDLLKVESGLETEDELTPELRGLAAKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIM
FDEPDSGVDIENVELLAEEINVLLDKDKKPGLRKKAGLLITHLGYILNFVSADTAHVLMDGRIACSGNPQEIIEDIRKDG
FKGCVECCGIH
>Mature_251_residues
MLLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQIIFKGEDITDLSTTERVRMG
IGVSFQNPPAIRGVKLMDLLKVESGLETEDELTPELRGLAAKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIM
FDEPDSGVDIENVELLAEEINVLLDKDKKPGLRKKAGLLITHLGYILNFVSADTAHVLMDGRIACSGNPQEIIEDIRKDG
FKGCVECCGIH

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=164, Percent_Identity=28.6585365853659, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787972, Length=254, Percent_Identity=36.6141732283465, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1789593, Length=236, Percent_Identity=31.7796610169492, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=30.5785123966942, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=29.646017699115, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789864, Length=248, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788761, Length=180, Percent_Identity=31.6666666666667, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788165, Length=232, Percent_Identity=26.7241379310345, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=26.4462809917355, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789962, Length=234, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87082268, Length=154, Percent_Identity=27.9220779220779, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=203, Percent_Identity=31.5270935960591, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=25.8771929824561, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788506, Length=167, Percent_Identity=32.9341317365269, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=229, Percent_Identity=27.0742358078603, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27694; Mature: 27694

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQ
CEEEEEEEEEEECHHHHHHHHHHEEECCCEEEEECCCCCCCCEEEEEEECCCCEEEECCE
IIFKGEDITDLSTTERVRMGIGVSFQNPPAIRGVKLMDLLKVESGLETEDELTPELRGLA
EEECCCCCCCCCHHHHHHHEECEEECCCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHHHH
AKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIMFDEPDSGVDIENVELLAEEI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
NVLLDKDKKPGLRKKAGLLITHLGYILNFVSADTAHVLMDGRIACSGNPQEIIEDIRKDG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHCC
FKGCVECCGIH
HHHHHHHHCCC
>Mature Secondary Structure
MLLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQ
CEEEEEEEEEEECHHHHHHHHHHEEECCCEEEEECCCCCCCCEEEEEEECCCCEEEECCE
IIFKGEDITDLSTTERVRMGIGVSFQNPPAIRGVKLMDLLKVESGLETEDELTPELRGLA
EEECCCCCCCCCHHHHHHHEECEEECCCCCCCCHHHHHHHHHHCCCCCCHHCCHHHHHHH
AKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIMFDEPDSGVDIENVELLAEEI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
NVLLDKDKKPGLRKKAGLLITHLGYILNFVSADTAHVLMDGRIACSGNPQEIIEDIRKDG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCHHHHHHHHHHCC
FKGCVECCGIH
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]