Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

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Identifier: 15679159

GI number: 15679159

Start: 1059459

End: 1059932

Strand: Direct

Name: Not Available

Synonym: MTH1148

Alternate gene names: NA

Gene position: 1059459-1059932 (Clockwise)

Preceding gene: 15679158

Following gene: 15679160

Centisome position: 60.49

GC content: 53.16

Gene sequence:

>474_bases
ATGATAAGGGTTGCGACTGCTGAGTGCTTCACCCATGGATTCGTTGCAAGGGAGATACACGCCTACTCCATGGGCTACCC
TGGAGGCTACAGCTGGAGTGTGGACTCAGATGTGGTGCTGGTGGCAGGTCTCTTCATACCAACCCTCTCAGGTATAAGGA
GCATCCTCAAATTTGAACCCCCTGAACCCTCAGCCACCCTGAATGACATCAAGGTCTACACTGAAGAGGAGGATGAGAGG
GTGGCCCTCATGATGGCAAGATCCGTGAGGGAGCTCACCTCAGCAGATCTGGGTATAGGTACGACCGCAGGTATCGGAAG
GGGCGGCATTGCAGTTGTCTCAGAAAACAGGGAGGAGGTCATAAACTCCGATGTTGAAGCGGACCTCAGGTTCTCAGGGG
CTGAAGAGATCCTCATGAGACAGAGATCCGGTATACGGTGCGCACTTGAACTCCTTGAATCCTTCCTAGAATAG

Upstream 100 bases:

>100_bases
AACTGATAAGGGACTGGGAGCCAGTAACCCCGTACGTCCTTGACCGTGTATCGGAGGTTATGACTGCAGAGATACTCAAA
CTCCTCAGGAGGAAACTCGG

Downstream 100 bases:

>100_bases
GATTGGCATAGGAATCTATTTATTGTATCCTACGAATAATTTATTAAAAGGAAGAAATAGGTGGTGGTTTAACTGCTTCT
TGAAATAACCGACCTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIRVATAECFTHGFVAREIHAYSMGYPGGYSWSVDSDVVLVAGLFIPTLSGIRSILKFEPPEPSATLNDIKVYTEEEDER
VALMMARSVRELTSADLGIGTTAGIGRGGIAVVSENREEVINSDVEADLRFSGAEEILMRQRSGIRCALELLESFLE

Sequences:

>Translated_157_residues
MIRVATAECFTHGFVAREIHAYSMGYPGGYSWSVDSDVVLVAGLFIPTLSGIRSILKFEPPEPSATLNDIKVYTEEEDER
VALMMARSVRELTSADLGIGTTAGIGRGGIAVVSENREEVINSDVEADLRFSGAEEILMRQRSGIRCALELLESFLE
>Mature_157_residues
MIRVATAECFTHGFVAREIHAYSMGYPGGYSWSVDSDVVLVAGLFIPTLSGIRSILKFEPPEPSATLNDIKVYTEEEDER
VALMMARSVRELTSADLGIGTTAGIGRGGIAVVSENREEVINSDVEADLRFSGAEEILMRQRSGIRCALELLESFLE

Specific function: Unknown

COG id: COG4016

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0254 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1148_METTH (O27216)

Other databases:

- EMBL:   AE000666
- EMBL:   U19363
- PIR:   H69019
- RefSeq:   NP_276276.1
- STRING:   O27216
- GeneID:   1471556
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1148
- NMPDR:   fig|187420.1.peg.1131
- eggNOG:   arNOG10389
- HOGENOM:   HBG539277
- OMA:   ECFTHGK
- ProtClustDB:   PRK00962
- BioCyc:   MTHE187420:MTH1148-MONOMER
- HAMAP:   MF_00673
- InterPro:   IPR009625
- PIRSF:   PIRSF018786
- ProDom:   PD021915

Pfam domain/function: PF06787 UPF0254

EC number: NA

Molecular weight: Translated: 17146; Mature: 17146

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVATAECFTHGFVAREIHAYSMGYPGGYSWSVDSDVVLVAGLFIPTLSGIRSILKFEP
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PEPSATLNDIKVYTEEEDERVALMMARSVRELTSADLGIGTTAGIGRGGIAVVSENREEV
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHH
INSDVEADLRFSGAEEILMRQRSGIRCALELLESFLE
HCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MIRVATAECFTHGFVAREIHAYSMGYPGGYSWSVDSDVVLVAGLFIPTLSGIRSILKFEP
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PEPSATLNDIKVYTEEEDERVALMMARSVRELTSADLGIGTTAGIGRGGIAVVSENREEV
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHH
INSDVEADLRFSGAEEILMRQRSGIRCALELLESFLE
HCCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463; 7730278