| Definition | Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome. |
|---|---|
| Accession | NC_000916 |
| Length | 1,751,377 |
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Identifier: 15678475
GI number: 15678475
Start: 385424
End: 386257
Strand: Direct
Name: Not Available
Synonym: MTH447
Alternate gene names: 15678475
Gene position: 385424-386257 (Clockwise)
Preceding gene: 15678474
Following gene: 15678476
Centisome position: 22.01
GC content: 50.84
Gene sequence:
>834_bases ATGGCAAAAATTCTTGTTGTTGAGGACGAGGCCATAGTGGCCATGGGTATAACCCACAAACTTGAATCAATGGGTCACAG GGTTGTGGAGACAGTTTCAACAGGTAAGGACGCCATAATGGCGTGCAAGGTCCATGAACCGGACCTCGTTCTCATGGACA TCGTCCTGAAGGGCGAAATGGATGGTATAGAGGCTGCAAGAAGGATCCGGGACCAGTTCAACATCCCGATAATATACCTG ACAGCCTATGCCGATGAGGAGATGCTGACACGTGCAAAGGTCACAGAGCCCTACGGGTACATAGTGAAGCCCTTCAAGTC ATCTGAACTCAATGCCAACATTGAGATGGCCATCTACCGGCACAGATCCGCAATGAGGGAGAAGGAACTCATGAAGAAGC AGATAATCTCAGACTTCTATAACTTCATCCTCAACGCGATGCCCTCAACCGGAGCCGATGAGGATGCCATCAGGGAACTG CTATCAGGTATATTCAGGGACAGGATCACACATGAACTCGGCCCCAGATTCAAGGCCCACATGGAGGAGTATCCGGACGA TGACCTCCTCGAGGCATACCTCGCATGGGTCGCAGACATATTTGAAGGCTTCACTGTGAGGGTGGGTTTCCTTGAGGACG AAGAGAACGTTTATGTTGAATTTGAGAACTGCCCTTGGCTTGAAGATGCCCGAAAGAACCCCGGCTTCTGCCTGAACTGT GAGGCCATCCTGAAGTTAAGTTTTGAATGGAGCGAACTCCCCGGTGACTTCAGGGCCATGGGGCAGATTGCAAGGGGAGA TGACAGGTGCCTCTTCCGGTTTGGTGTTAAGTAA
Upstream 100 bases:
>100_bases GGCGTCACATTAAACCTTATTCTGCAGTGACATCAAAGTATCAGGGGCAATGTCCAGACATTAGTCCTCAGTGATAGCGG TTCCATAAAGGAGGTTTATC
Downstream 100 bases:
>100_bases TTACCGGGTTTCAGTGTTGAGCGTATCAGAGCAAGTATAAAGAGACGTCAGGCTGAAGTTATGATGGTACACGCATGGAT GATACAATGAGGAGAACAGG
Product: sensory transduction regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAKILVVEDEAIVAMGITHKLESMGHRVVETVSTGKDAIMACKVHEPDLVLMDIVLKGEMDGIEAARRIRDQFNIPIIYL TAYADEEMLTRAKVTEPYGYIVKPFKSSELNANIEMAIYRHRSAMREKELMKKQIISDFYNFILNAMPSTGADEDAIREL LSGIFRDRITHELGPRFKAHMEEYPDDDLLEAYLAWVADIFEGFTVRVGFLEDEENVYVEFENCPWLEDARKNPGFCLNC EAILKLSFEWSELPGDFRAMGQIARGDDRCLFRFGVK
Sequences:
>Translated_277_residues MAKILVVEDEAIVAMGITHKLESMGHRVVETVSTGKDAIMACKVHEPDLVLMDIVLKGEMDGIEAARRIRDQFNIPIIYL TAYADEEMLTRAKVTEPYGYIVKPFKSSELNANIEMAIYRHRSAMREKELMKKQIISDFYNFILNAMPSTGADEDAIREL LSGIFRDRITHELGPRFKAHMEEYPDDDLLEAYLAWVADIFEGFTVRVGFLEDEENVYVEFENCPWLEDARKNPGFCLNC EAILKLSFEWSELPGDFRAMGQIARGDDRCLFRFGVK >Mature_276_residues AKILVVEDEAIVAMGITHKLESMGHRVVETVSTGKDAIMACKVHEPDLVLMDIVLKGEMDGIEAARRIRDQFNIPIIYLT AYADEEMLTRAKVTEPYGYIVKPFKSSELNANIEMAIYRHRSAMREKELMKKQIISDFYNFILNAMPSTGADEDAIRELL SGIFRDRITHELGPRFKAHMEEYPDDDLLEAYLAWVADIFEGFTVRVGFLEDEENVYVEFENCPWLEDARKNPGFCLNCE AILKLSFEWSELPGDFRAMGQIARGDDRCLFRFGVK
Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786911, Length=132, Percent_Identity=31.8181818181818, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005561 - InterPro: IPR011006 - InterPro: IPR008327 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]
EC number: 2.7.3.-
Molecular weight: Translated: 31766; Mature: 31635
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILVVEDEAIVAMGITHKLESMGHRVVETVSTGKDAIMACKVHEPDLVLMDIVLKGEM CCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCC DGIEAARRIRDQFNIPIIYLTAYADEEMLTRAKVTEPYGYIVKPFKSSELNANIEMAIYR CHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEHH HRSAMREKELMKKQIISDFYNFILNAMPSTGADEDAIRELLSGIFRDRITHELGPRFKAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH MEEYPDDDLLEAYLAWVADIFEGFTVRVGFLEDEENVYVEFENCPWLEDARKNPGFCLNC HHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHCCCCCEEEEH EAILKLSFEWSELPGDFRAMGQIARGDDRCLFRFGVK HHHEEEECCHHHCCCHHHHHHHHCCCCCCEEEEECCC >Mature Secondary Structure AKILVVEDEAIVAMGITHKLESMGHRVVETVSTGKDAIMACKVHEPDLVLMDIVLKGEM CEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCC DGIEAARRIRDQFNIPIIYLTAYADEEMLTRAKVTEPYGYIVKPFKSSELNANIEMAIYR CHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEHH HRSAMREKELMKKQIISDFYNFILNAMPSTGADEDAIRELLSGIFRDRITHELGPRFKAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH MEEYPDDDLLEAYLAWVADIFEGFTVRVGFLEDEENVYVEFENCPWLEDARKNPGFCLNC HHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCHHHHCCCCCEEEEH EAILKLSFEWSELPGDFRAMGQIARGDDRCLFRFGVK HHHEEEECCHHHCCCHHHHHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]