| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646152
GI number: 15646152
Start: 1623814
End: 1624998
Strand: Reverse
Name: Not Available
Synonym: HP1545
Alternate gene names: 15646152
Gene position: 1624998-1623814 (Counterclockwise)
Preceding gene: 15646153
Following gene: 15646151
Centisome position: 97.43
GC content: 37.47
Gene sequence:
>1185_bases ATGAAAAATAGCCCTTTGAATGGATTGAATGGACTAAAGGCGTTTTTAGAAACAAAGCCTAAGGAATACCATAAGTTTGA CCCTAGCCGCTTCATTCAAATTTATAAAGATTTTAAAAACGCTTTTTTTGAGATTCAAGCGAAAGTCATTCATGTTGTAG GGACTAATGGCAAGGGCAGCACGGGGCGGTTTTTAACCCTTTTATTAGCCGATCAAAATTTTAAGGTGTTGCATTTCACC TCCCCTCATGTTTTTGAATTTAGGGAGCGCTTTTTTTTGAATGGTTCTGTTGTTGGAGAAAGCGTTTTAGAAAACGCCCA CCAGCAATTACAATCGCACGCTTTCAGCAGCGCTTGCTCGTATTTTGAATACGCTACCTTACTGGCTGTCATGCTCGCTA AAGATTGCGATTATTTGGTTTTAGAAGCAGGGCTTGGGGGGGAGTTTGACAGCACGAACGCTTTAAAAAAAACCCTAAGC GTTTTCACCCCCATTGATTATGATCATAAGGAATTTTTAGGGGATAGTTTAGAAAGCATTGCGCAAACTAAATTAAAAGC GATGGGCTCTCTTAGCATCATCGCTCCCCAACAAGAACTGGTTTTAAATGCGGCTCAAAAAATCGCTAAAGAAAAACACG CAAAATTGATTGTGGTTCAAAATGAAATTTCAAAAGGAGTGAGGGATTATATTGAACGCTACCATTTAGCCCGTTTTTTA GCGATGAATTTGGAAGTGGCTCTAAAAGCGTTTGAAACGCTTTTGCCATGCAATAAACAAGAAGTTTTAAAAAACCTAAA GCCCCTAAATTTAATCGGCCGTTGCGAGCTTTTAAGCCCTAATATCTTAATAGATGTGGGGCATAACCCCCATAGCGCCA AAGCCTTAAAAGAAGAAATCAAACGCATTTTTAACGCTAAAATCATTTTAATTTATAATTGCTATCAAGATAAAGACGCT TTTTTGGTGCTAGAAATTTTAAAGCCTGTCATTAAAAAGGTTTTGATTTTAGAATTGCATGAAGAAAGGGTTATCAAGTT AGAAAAGCTTAAAGGGATTTTAGAAACTTTAGGGTTAGAATACGCTTTGTTTGAAGATGTGGAAGAAAATGAAAATTATT TGGTGTATGGCTCATTTCTGGTGGCCAACGCTTTTTATAAACGCTATCAAGAGAAGAGGGATTGA
Upstream 100 bases:
>100_bases CTTAATACCTACCAGAACCGCTATTATGCTATCAATCAGGCTGTGGAACAGACTTTGACTAAATTTGTGGCTCAAATCGC TTATGAGGGGAAATTCAATA
Downstream 100 bases:
>100_bases TGCCGCAAAACCAGCTTGTGATCACCATCATTGATGAATCAGGCTCTAAACAGCTCAAATTTTCTAAAAATTTAAAACGC AACCTCATCATTTCTGTTGT
Product: folylpolyglutamate synthase (folC)
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKNSPLNGLNGLKAFLETKPKEYHKFDPSRFIQIYKDFKNAFFEIQAKVIHVVGTNGKGSTGRFLTLLLADQNFKVLHFT SPHVFEFRERFFLNGSVVGESVLENAHQQLQSHAFSSACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALKKTLS VFTPIDYDHKEFLGDSLESIAQTKLKAMGSLSIIAPQQELVLNAAQKIAKEKHAKLIVVQNEISKGVRDYIERYHLARFL AMNLEVALKAFETLLPCNKQEVLKNLKPLNLIGRCELLSPNILIDVGHNPHSAKALKEEIKRIFNAKIILIYNCYQDKDA FLVLEILKPVIKKVLILELHEERVIKLEKLKGILETLGLEYALFEDVEENENYLVYGSFLVANAFYKRYQEKRD
Sequences:
>Translated_394_residues MKNSPLNGLNGLKAFLETKPKEYHKFDPSRFIQIYKDFKNAFFEIQAKVIHVVGTNGKGSTGRFLTLLLADQNFKVLHFT SPHVFEFRERFFLNGSVVGESVLENAHQQLQSHAFSSACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALKKTLS VFTPIDYDHKEFLGDSLESIAQTKLKAMGSLSIIAPQQELVLNAAQKIAKEKHAKLIVVQNEISKGVRDYIERYHLARFL AMNLEVALKAFETLLPCNKQEVLKNLKPLNLIGRCELLSPNILIDVGHNPHSAKALKEEIKRIFNAKIILIYNCYQDKDA FLVLEILKPVIKKVLILELHEERVIKLEKLKGILETLGLEYALFEDVEENENYLVYGSFLVANAFYKRYQEKRD >Mature_394_residues MKNSPLNGLNGLKAFLETKPKEYHKFDPSRFIQIYKDFKNAFFEIQAKVIHVVGTNGKGSTGRFLTLLLADQNFKVLHFT SPHVFEFRERFFLNGSVVGESVLENAHQQLQSHAFSSACSYFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALKKTLS VFTPIDYDHKEFLGDSLESIAQTKLKAMGSLSIIAPQQELVLNAAQKIAKEKHAKLIVVQNEISKGVRDYIERYHLARFL AMNLEVALKAFETLLPCNKQEVLKNLKPLNLIGRCELLSPNILIDVGHNPHSAKALKEEIKRIFNAKIILIYNCYQDKDA FLVLEILKPVIKKVLILELHEERVIKLEKLKGILETLGLEYALFEDVEENENYLVYGSFLVANAFYKRYQEKRD
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=177, Percent_Identity=31.0734463276836, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI66932990, Length=177, Percent_Identity=31.0734463276836, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1788654, Length=357, Percent_Identity=29.1316526610644, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17553150, Length=320, Percent_Identity=26.875, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71984923, Length=320, Percent_Identity=26.875, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17553148, Length=320, Percent_Identity=26.875, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323760, Length=324, Percent_Identity=25, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324815, Length=313, Percent_Identity=27.4760383386581, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24641571, Length=183, Percent_Identity=32.7868852459016, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 44881; Mature: 44881
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSPLNGLNGLKAFLETKPKEYHKFDPSRFIQIYKDFKNAFFEIQAKVIHVVGTNGKGS CCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCC TGRFLTLLLADQNFKVLHFTSPHVFEFRERFFLNGSVVGESVLENAHQQLQSHAFSSACS CCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALKKTLSVFTPIDYDHKEFLGDSLESI HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AQTKLKAMGSLSIIAPQQELVLNAAQKIAKEKHAKLIVVQNEISKGVRDYIERYHLARFL HHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHH AMNLEVALKAFETLLPCNKQEVLKNLKPLNLIGRCELLSPNILIDVGHNPHSAKALKEEI HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHCCEEEECCCEEEECCCCCCHHHHHHHHH KRIFNAKIILIYNCYQDKDAFLVLEILKPVIKKVLILELHEERVIKLEKLKGILETLGLE HHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YALFEDVEENENYLVYGSFLVANAFYKRYQEKRD HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNSPLNGLNGLKAFLETKPKEYHKFDPSRFIQIYKDFKNAFFEIQAKVIHVVGTNGKGS CCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCC TGRFLTLLLADQNFKVLHFTSPHVFEFRERFFLNGSVVGESVLENAHQQLQSHAFSSACS CCCEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YFEYATLLAVMLAKDCDYLVLEAGLGGEFDSTNALKKTLSVFTPIDYDHKEFLGDSLESI HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AQTKLKAMGSLSIIAPQQELVLNAAQKIAKEKHAKLIVVQNEISKGVRDYIERYHLARFL HHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHH AMNLEVALKAFETLLPCNKQEVLKNLKPLNLIGRCELLSPNILIDVGHNPHSAKALKEEI HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHCCEEEECCCEEEECCCCCCHHHHHHHHH KRIFNAKIILIYNCYQDKDAFLVLEILKPVIKKVLILELHEERVIKLEKLKGILETLGLE HHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YALFEDVEENENYLVYGSFLVANAFYKRYQEKRD HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]