| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15646153
GI number: 15646153
Start: 1624988
End: 1625500
Strand: Reverse
Name: Not Available
Synonym: HP1546
Alternate gene names: NA
Gene position: 1625500-1624988 (Counterclockwise)
Preceding gene: 15646154
Following gene: 15646152
Centisome position: 97.46
GC content: 39.38
Gene sequence:
>513_bases ATGAGGGCTTTACTTTTTTTTATTTTGTTACTTTGGTTCAAGGGTTGTGGGTATAAGCCTATTGCAGCTTACGCTCAAAA CGCTTTAGGCGATAGCGTATACGTGAAACTCATTGTGAATTTGCCTAACCCTGAAAACTCTGTAGAGTTTAAGGATTTGA TGAATCGTTTAGTCGTGCAACGCTTCCAAAGCCGCTTAGCGAGTGAAAAGGATGCGGATTCTATCATTATTATAGAAATC ACGAATGTAACCGATACGAGTATCACGCAAAATAAAGAAGGCTTCACGACTTTCTATCGCGCAACCGTGTCTGTGAATTA CACCTACGATAATAAAAGAGGCACACAAAAGACTTTTCAAGATAGCGGGTATTACAATTACGCTGTGAATTTGCAAGACC CCCTTAATACCTACCAGAACCGCTATTATGCTATCAATCAGGCTGTGGAACAGACTTTGACTAAATTTGTGGCTCAAATC GCTTATGAGGGGAAATTCAATAATGAAAAATAG
Upstream 100 bases:
>100_bases TTATTGTTTTGGCTAAAAAAGAATTAGAGAAATATTTAGAGAATGCGAGCGTTAAAAAAGAAATTTATGTGCCTAATAAG CTTGTTAATTTTGTTATCGC
Downstream 100 bases:
>100_bases CCCTTTGAATGGATTGAATGGACTAAAGGCGTTTTTAGAAACAAAGCCTAAGGAATACCATAAGTTTGACCCTAGCCGCT TCATTCAAATTTATAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRALLFFILLLWFKGCGYKPIAAYAQNALGDSVYVKLIVNLPNPENSVEFKDLMNRLVVQRFQSRLASEKDADSIIIIEI TNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQDSGYYNYAVNLQDPLNTYQNRYYAINQAVEQTLTKFVAQI AYEGKFNNEK
Sequences:
>Translated_170_residues MRALLFFILLLWFKGCGYKPIAAYAQNALGDSVYVKLIVNLPNPENSVEFKDLMNRLVVQRFQSRLASEKDADSIIIIEI TNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQDSGYYNYAVNLQDPLNTYQNRYYAINQAVEQTLTKFVAQI AYEGKFNNEK >Mature_170_residues MRALLFFILLLWFKGCGYKPIAAYAQNALGDSVYVKLIVNLPNPENSVEFKDLMNRLVVQRFQSRLASEKDADSIIIIEI TNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQDSGYYNYAVNLQDPLNTYQNRYYAINQAVEQTLTKFVAQI AYEGKFNNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19596; Mature: 19596
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLFFILLLWFKGCGYKPIAAYAQNALGDSVYVKLIVNLPNPENSVEFKDLMNRLVVQ CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH RFQSRLASEKDADSIIIIEITNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQ HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHC DSGYYNYAVNLQDPLNTYQNRYYAINQAVEQTLTKFVAQIAYEGKFNNEK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRALLFFILLLWFKGCGYKPIAAYAQNALGDSVYVKLIVNLPNPENSVEFKDLMNRLVVQ CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH RFQSRLASEKDADSIIIIEITNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQ HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHC DSGYYNYAVNLQDPLNTYQNRYYAINQAVEQTLTKFVAQIAYEGKFNNEK CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA