| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646090
GI number: 15646090
Start: 1555448
End: 1556245
Strand: Reverse
Name: Not Available
Synonym: HP1481
Alternate gene names: NA
Gene position: 1556245-1555448 (Counterclockwise)
Preceding gene: 15646091
Following gene: 15646089
Centisome position: 93.31
GC content: 40.35
Gene sequence:
>798_bases ATGCGAGTGTTTGCTTTGCAATTAGAATCTTTTAAAGAAAATCTCATGCAATCCTTATTCAACTCTATACCCAAGAAAAG CGTGATCGTGTTGCCTGAATACGTGATCAACCCCTTTTTCCACCATAACATGGGATTGGATGTGAATGAAATCAGCGATC AGTCTGCACGAGCGGTTGAGTTTTTATCGCAAAAATGCGAAGAATTAGATTTGATCGTTTCAGCCCCGGTGCTTTTAGAA GAACATTCTAAAATCTATAAAAAAATCGCCCTCATTTCTAAAGAAAGCGTGAAGTATTACACGCAACAACGCTTAATTCC CTATCCTCATTGGGATGAAGAGAGCTTTTTTGACAACGAAAAAAGTGCTTTTAAAGAATTGTTAGTCTTTGAAAGAGACG GCTTGAAATTCGCCCCTTTGTTTGGCTTTGAAGCGCATTTTGATGAAATATGGGTTCAGGCTAAAAATCAGGGCGTGGAT GTGGTGCTTTTAAGCAGCGTGGCCACCTTTGAATCCAATGAAAGATGGCGGCTTTTGTGCCAGATGCGCGCTTTTTGCGC TTCTTGCGTGGTGGTTAGGGCTAATAGGATCGGAGCGTATCGCCAGATCATTGTAGAAGAAGATCAAAAAAACGAATTTT TGTGGAAATTTTATGGGGATAGTTTTGTGGCCTTGCCTAATGGCGCTATTGAAGATTCTTTAGAGGGTAAAATGGGGGCT TTGAACGCTCAAATAGATAAAAACGATATAGACGAATGGGCTAAATTGTGGCATTTTAGAACGATTAAAGAGGGTTGA
Upstream 100 bases:
>100_bases TAAAACGGCCATGCAAGAGTTGTTTTTGGCTCAAAAGCTTTTAGAAAACGCTTATTTAGAGCATGAAAAACTCCAAACGC CAGACCAAAAGGCTTAAAGC
Downstream 100 bases:
>100_bases ATGATTGATAGAAAACTTTTATTGCAAGATTTTGACAAGGTGGCTCTTTCTTTAAAAAAGCGTAATAATGCGATGGATGA TGAATTAGAGCGTTTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Carbon-Nitrogen Family; Carbon-Nitrogen Hydrolase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA LNAQIDKNDIDEWAKLWHFRTIKEG
Sequences:
>Translated_265_residues MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA LNAQIDKNDIDEWAKLWHFRTIKEG >Mature_265_residues MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVEFLSQKCEELDLIVSAPVLLE EHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNEKSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVD VVLLSSVATFESNERWRLLCQMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA LNAQIDKNDIDEWAKLWHFRTIKEG
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30759; Mature: 30759
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVE CEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCHHHHCCHHHHHHH FLSQKCEELDLIVSAPVLLEEHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCH KSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVDVVLLSSVATFESNERWRLLC HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCEEEEEHHHHCCCCCHHHHHH QMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA HHHHHHHHHHHHHHHHHCHHHHHEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC LNAQIDKNDIDEWAKLWHFRTIKEG CCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVFALQLESFKENLMQSLFNSIPKKSVIVLPEYVINPFFHHNMGLDVNEISDQSARAVE CEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCHHHHCCHHHHHHH FLSQKCEELDLIVSAPVLLEEHSKIYKKIALISKESVKYYTQQRLIPYPHWDEESFFDNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCH KSAFKELLVFERDGLKFAPLFGFEAHFDEIWVQAKNQGVDVVLLSSVATFESNERWRLLC HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHEECCCCCCEEEEEHHHHCCCCCHHHHHH QMRAFCASCVVVRANRIGAYRQIIVEEDQKNEFLWKFYGDSFVALPNGAIEDSLEGKMGA HHHHHHHHHHHHHHHHHCHHHHHEEECCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCC LNAQIDKNDIDEWAKLWHFRTIKEG CCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA