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Identifier: 15646091

GI number: 15646091

Start: 1556249

End: 1556509

Strand: Reverse

Name: Not Available

Synonym: HP1482

Alternate gene names: 15646091

Gene position: 1556509-1556249 (Counterclockwise)

Preceding gene: 15646092

Following gene: 15646090

Centisome position: 93.32

GC content: 36.78

Gene sequence:

>261_bases
ATGCAAGATGAATTATTTGAAACCGAAAAAATCCCCCCAAAAAACACTAAAAATACTAAAAACGCCCCTAAAAAAAGTTT
TGAAGAGCATGTTCATTCCCTAGAGCGAGCCATAGATCGCTTGAATGATCCCAATTTATCCTTAAAAGACGGGATGGATT
TGTATAAAACGGCCATGCAAGAGTTGTTTTTGGCTCAAAAGCTTTTAGAAAACGCTTATTTAGAGCATGAAAAACTCCAA
ACGCCAGACCAAAAGGCTTAA

Upstream 100 bases:

>100_bases
GCATGAATTAAGAAACGCAGGGTTTGAGATTTTAAGGACTGAAGATTCTATCGCTCAAATTTCAACGACCATGCTTGTTA
AAAAAAACTAAAGGAATGTT

Downstream 100 bases:

>100_bases
AGCATGCGAGTGTTTGCTTTGCAATTAGAATCTTTTAAAGAAAATCTCATGCAATCCTTATTCAACTCTATACCCAAGAA
AAGCGTGATCGTGTTGCCTG

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKDGMDLYKTAMQELFLAQKLLENAYLEHEKLQ
TPDQKA

Sequences:

>Translated_86_residues
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKDGMDLYKTAMQELFLAQKLLENAYLEHEKLQ
TPDQKA
>Mature_86_residues
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKDGMDLYKTAMQELFLAQKLLENAYLEHEKLQ
TPDQKA

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 10039; Mature: 10039

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKDGMDLYKTAMQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHH
ELFLAQKLLENAYLEHEKLQTPDQKA
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKDGMDLYKTAMQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHH
ELFLAQKLLENAYLEHEKLQTPDQKA
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA