| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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The map label for this gene is flgA
Identifier: 15646086
GI number: 15646086
Start: 1548958
End: 1549614
Strand: Reverse
Name: flgA
Synonym: HP1477
Alternate gene names: NA
Gene position: 1549614-1548958 (Counterclockwise)
Preceding gene: 15646087
Following gene: 15646085
Centisome position: 92.91
GC content: 36.68
Gene sequence:
>657_bases TTGAAAATTTTAATCCTTTTTTTTATCTGTTTAAACGCATTGTTCGCCCTAGATTCAAACGCACTTAAAGCAGAGATTAA AGAAGTTTACCTTAAAGAATACAAAGACTTAAAATTAGAAATTGAAACCATTAACTTAGAAATCCCAGAGCGCTTTTCTA ACGCTTCCATTTTAAGCTATGAATTAAACGCTTCCAATAAGCTTAAAAAAGATGGGGTCGTGTTTTTAAGGTTGGAAAAT GATCCTAATTTACGCCTACCGGTGCGTTATAGCGTGATAGGCAGCATGCAGGCTTTTAAAAGCGTTAGCGCGATTAAAAA AGATGAAAACATCACCGCTAATAACACTCAAAAAGAGCGCATTTTGTTTGGTGCGCTTTCTAACCCCTTATTAGAGGGCG CGATTGATAAAGTGAGCGCGAAAAATTTTATCCCCCCTAACACGCTTTTAAGCACGGATAAAACCCAAGCTTTAATTATC GTGCGTAAAAATGACATTATCACCGGGGTGTATGAAGAGGGGCAAATCAGCATAGAAATAAGCCTAAAAGCCCTAGAAAA TGGCGCGCTTAATCAAATCATTCAAGCGAAAAATTTAGAAAGCAATAAAATACTCAAAGCAAAAGTGTTGAGCAGCTCTA AAGCGCAAATCTTATAA
Upstream 100 bases:
>100_bases TAGAAAAAGGCTTGAGCGGTTTGTGCTTGAAAATCAATTGCGGAGGGAATGTCTATGATAAAATCTCAGAAAAATTTGTA GAAAAAGTGGATAACGGGTT
Downstream 100 bases:
>100_bases AGGACATTCATGAAATTGGTTTTAGGCATCAGTGGAGCGAGCGGGATACCCCTAGCCTTGCGGTTTTTAGAAAAATTACC CAAAGAAATTGAAGTTTTTG
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellum Ring Component
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPERFSNASILSYELNASNKLKKDGVVFLRLEN DPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKVSAKNFIPPNTLLSTDKTQALII VRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL
Sequences:
>Translated_218_residues MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPERFSNASILSYELNASNKLKKDGVVFLRLEN DPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKVSAKNFIPPNTLLSTDKTQALII VRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL >Mature_218_residues MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPERFSNASILSYELNASNKLKKDGVVFLRLEN DPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKVSAKNFIPPNTLLSTDKTQALII VRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24308; Mature: 24308
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPERFSNASILSY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEE ELNASNKLKKDGVVFLRLENDPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKER EECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE ILFGALSNPLLEGAIDKVSAKNFIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEI EEEEHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEECCCEEEEEE SLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL EEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPERFSNASILSY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCEEEEE ELNASNKLKKDGVVFLRLENDPNLRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKER EECCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE ILFGALSNPLLEGAIDKVSAKNFIPPNTLLSTDKTQALIIVRKNDIITGVYEEGQISIEI EEEEHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEECCCEEEEEE SLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL EEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA