| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646075
GI number: 15646075
Start: 1536794
End: 1537927
Strand: Reverse
Name: Not Available
Synonym: HP1466
Alternate gene names: 15646075
Gene position: 1537927-1536794 (Counterclockwise)
Preceding gene: 15646077
Following gene: 15646074
Centisome position: 92.21
GC content: 40.3
Gene sequence:
>1134_bases ATGAAGACAGAGAAACAAAAATTTTTAGAGATGCGTAAAGATGGGGCGAACTCTGTGCTGATTTTAAGAGGGGATTGGGA TTTTAAAACGAGCGTGTTTCGTTTAGATGAGTTGAAAAAAAATTTATTAGATCATCAAGGGCCTTTAAAAATGGATTTTT CAGGGTGCCAAAAAGTGGATTTTGTTTTTGGCATGTTTTTATTTGATTTAGTTAAGGAGCGTTCTTTAAACATTGAATTG TGTAACGTGAGTGAGAATAACGCATGCGCTTTGAAAGTGGTTAAAGACTGGCTTGAAAAAGAAGAGGATTTAGAGTCTAA AAAAGCGGGCAAACACTACGAACTTTTGATCACTAAATTGGGTAAGAGTATCGTAGAGACTTATAATACCTTTTTAAACG CATTCAATTTTTGCGGCATGATTTTATTCTACTTCATTAAAAGCGTTTTCAACCCCAAACGCTTTTGTATCACTCCTTTG CTCTATCATATCAATGAATCCGGGTTTAAGGTTTTGCCAGTGAGTATTTTAACGGTGTTTATCGTGGGGTTTGCCGTTGC TTTACAAGGGGCTTTACAATTACAAGACATGGGCGCGCCTTTAATGTCGGTGGAAATGACGGCTAAACTCGCTTTAAGAG AAATCGGCCCTTTTATTTTAACCCTTGTGGTGGCCGGGAGGAGCGCGAGCAGTTTTACCGCGCAAATTGGGGTGATGAAG ATCACTGAGGAATTAGACGCGATGAAAACCATGGGCTTTAACCCTTTTGAATTTTTAGTGTTGCCTAGGGTGTTAGCCTT AGTGATTGTTTTGCCTTTATTGGTGTTTATTGCCGATGCGTTCGCCATTCTTGGGGGCATGTTTGCGATTAAATACCAAT TGGATTTAGGCTTCCCGAGCTATATTGACAGATTCCATGACACAGTGGGTTGGAACCATTTTTTGGTAGGGATTGTCAAA GCCCCTTTTTGGGGGTTTGCGATTGCGATGGTAGGGTGCATGCGCGGGTTTGAAGTCAAGGGGGATACTGAGAGCATTGG GCGCTTGACCACTATTAGCGTCGTGAACGCTTTGTTTTGGATCATTTTCTTAGACGCTATTTTTTCTATCATCTTTTCTA AGTTGAACATATAA
Upstream 100 bases:
>100_bases TTGTTTAACCTTTTGTTTTATCATTGTGTTAAAATAGTCGTTTTAACAAACAAAATTTTGTTAATAGATTTTACCTAATC TGAGAGAGAATTATATTTTA
Downstream 100 bases:
>100_bases TGAACGCTACTAACAATCAAGTCTTAATTGAAGTGAAGGATCTCCATAGCGCTTTTGGGAGCACCATTATTCATAGGGGC GTGAGTTTTAGCGTGCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLVKERSLNIEL CNVSENNACALKVVKDWLEKEEDLESKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAIFSIIFSKLNI
Sequences:
>Translated_377_residues MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLVKERSLNIEL CNVSENNACALKVVKDWLEKEEDLESKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAIFSIIFSKLNI >Mature_377_residues MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLVKERSLNIEL CNVSENNACALKVVKDWLEKEEDLESKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAIFSIIFSKLNI
Specific function: Could be part of an ABC transporter complex [H]
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=30.6201550387597, Blast_Score=93, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 42453; Mature: 42453
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVD CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH FVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYELLITKL HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH IVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH YIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH IIFLDAIFSIIFSKLNI HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVD CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH FVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKAGKHYELLITKL HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH IVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH YIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH IIFLDAIFSIIFSKLNI HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA