| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646042
GI number: 15646042
Start: 1503438
End: 1506008
Strand: Reverse
Name: Not Available
Synonym: HP1433
Alternate gene names: NA
Gene position: 1506008-1503438 (Counterclockwise)
Preceding gene: 15646043
Following gene: 15646040
Centisome position: 90.3
GC content: 37.22
Gene sequence:
>2571_bases ATGCTAAGCTATAAGCATTCTAACGCCACCTTACCCATTTTATGGGGCGAAGCTAAAAGGGGCGATTTTGATGATTTGGA CAAAGCTTTCACGCAACTTCTTTTAACCATAGGCAAGCACAGGCTTTATACCCACCACACACCACCTTATTTGTGCGCTT TTAACGCTTTTAAAATGGAATTTATCGCCTTTGATGACACGATCACAAGCTTTTTTTATAAAAGCGATATAGATTTTTCT ATCACCCCAAGCAACCACAACACAGAAGGTTTTAAACATGCTTTAGACGCGTTTAAAGCCATGAGCAAATCCCATAAATT CGTTTTTGACTTTAAAACCCAAAGCCAAGAATGCAAAGAATTTATCAAAAACCGTTTAAATTCTAGCCATTTACTCAGCA AAATCCAAATTGACAAAAACAATTTCTTTACGATCTATCAAAAGTGGCTTGAAATTGTCAAACCCACCATTGACATAAAT TGGGAGGTGGCTAAAACTAAAGACATTTTAGACGCAGACTATTATTTAGCGGATTTGCTTAGCGATGGCGATAAAACCAT TATTGAGAAATTGCACACGATTTTAAGATCGAGCCATTATAAATTGAATAGGGGTGTGAATGAATTAGGCAAAATGGATT TTATGGAAGTTGGTTTCACAGACAGCCAACAAGCCCATCAAGAATTTTGGAGCGTTTATGAACGACCGCCTAAAAGAGAA TTTCAAGCCTCTATTTTAGAGCGGCGCGACTTGTTAGTACCAAGCGATGTGAGAGAAAGGAAAGGGGCGTTTTTCACCCC TAAAATCTGGGTAGAAAAGAGTCAAGAATATTTAGCTAAAGCTTTGGGGCAAGATTATCAAGAGGATTGTATCATTTGGG ATTGCGCTGGGGGGACTGGGAATTTGCTTCGAGGTTTATTGAATAAGGCTAATTTGTATCTATCCACTTTAGATCATAAC GATGTGGCAATCGTTAAAGATCTGGCTGCAAAAAACCACTTAAAATTACTGGAAAATCATGTTTTCCAATTTGACTTTTT AAACGATGATTTTTTCAGCGATAAAACGCCAAAAAGCTTGCAAGAAATCTTAAAAGACAAAGAGAAACGAAAAAAGCTCA TCATTTACATCAACCCGCCCTATGCAGAAGCAGGTAATAAATCTAAGATGAGTGGCACAGGCGAACATAAAGCCAAAGTG GCACGAGACAATCTCATCTGTGAAAAATACAAAAATGAATTAGGCAAGGCTAATAATGAAGTTTTTGCACAATTTTTCAT GCGTATTTACAAAGAATTAAACGGTGTTATCCTTGCAAGTTTTTCAACTTTGAAAAACTTGCAAGGATCTAATTTTAAAA AATTCAGAGAAATCTTTAAAGCTAAATTTTTAGAGGGGTTTATGGTGCCAGCAGACACTTTTGATAATGTTAGGGGGCAA TTTCCTATCGGCTTTTTAGTGTGGGATACAAGCTCTATTCTTCCTAAAGAAAACCCCCTAAATTTAGGGGGCAACTCTAA AGAAGAGAAACAAAACTCCAATTTAATCTTAGACCAAGACAATTTGAAAGATAATCCCTTGAAAGAGCGTTTTTGCCTTT TAGACATAAACGCTCCTAATAGGAAGATGTGTTCCCAAAGCAGAACAAGAACTAAGGGGACACAAAAGCATTCTACAGCA GCCCCCTTTGAAACCCCTTTACACACTGTTAGTTTAGAAATATTTGATAGTTTCGGCGGATTTTTAGGCAGTAAAAAAAT ATACACTCACACAATAGACAAAATGCTTACTTTAGCGGATTATTTACAAAAGTTTCAGCCAACAAAAAGAGACACTATTT TTGGCTATTTAGATCCTGGTCGCAATAGTTTTCAACATCAAAATCTAATTCATATTAGCATTATTGACAAATCAAAACAA TCGCATGTAAAATATTTTCCAATCATTGCAACTACAATTTTGTTGGTATCTGTATTTTTCTCCATCCGCCATTGCATCAA AGCCACATGGCAAAACGATAGGGATCAATTTTACGCCCCCTATGACGATGCGTTCCAAGACGACAGCGAGTTTAAAAACA ATTGTTTGATTTTCATGCTTTTTCACACCCAGAACCGCATCACTACCGCTCAAGGGACTAACCATTTTATCCCCTTTAGC GAAACTGAAGTCAATGCCAAAGAAAGATATTCTAGCCACGCTCTATTAGAGTTTTTAAAAGGCGAAATCAAAGAACTTAA AGAGAACGATAGCCTCTTTTTAAGTGCCAAAAAAGAAAACAAGCCCCTGAAATTCAGCCCGAGCGCTTCAAAGGTGTTTG ACGCTAGCAGAGAGGTTTATCGCTATTACCACACACAAGATTTCACAAACCGCCCCTATAACGCTAACGCAAGCCTTTAT GACATCAAAGAATTTTTTCAAGGCCGTAACAAGCAAGGCAAATTAAATTTACCCGCTAAAGCTAAAGATGAATATTACAA ACAGCTTTACGCTAATTTGCAAGACGCCCTAAAAGATCTCGCCAAAGAAATACAGCCTAAAGTCTATGAATACGGGTTTT TAAGGGAGTGA
Upstream 100 bases:
>100_bases AGATTTCAGCAACCTCAATGAAGAACCCTTAAAAAACCAAATCAAAGCCGAGTTTTTTAAGGATAAGAAATTCCTTTATA GCGGGGATAAAATAGATTTC
Downstream 100 bases:
>100_bases TTTTTAAGACAAATAATCAAAAAGCTAGAGCAAGCGGTATTTTTTAAAAGCACTCTATGAGGGGATTTAGTTTTATAGAG GGGAGAATTATTTCTATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MLSYKHSNATLPILWGEAKRGDFDDLDKAFTQLLLTIGKHRLYTHHTPPYLCAFNAFKMEFIAFDDTITSFFYKSDIDFS ITPSNHNTEGFKHALDAFKAMSKSHKFVFDFKTQSQECKEFIKNRLNSSHLLSKIQIDKNNFFTIYQKWLEIVKPTIDIN WEVAKTKDILDADYYLADLLSDGDKTIIEKLHTILRSSHYKLNRGVNELGKMDFMEVGFTDSQQAHQEFWSVYERPPKRE FQASILERRDLLVPSDVRERKGAFFTPKIWVEKSQEYLAKALGQDYQEDCIIWDCAGGTGNLLRGLLNKANLYLSTLDHN DVAIVKDLAAKNHLKLLENHVFQFDFLNDDFFSDKTPKSLQEILKDKEKRKKLIIYINPPYAEAGNKSKMSGTGEHKAKV ARDNLICEKYKNELGKANNEVFAQFFMRIYKELNGVILASFSTLKNLQGSNFKKFREIFKAKFLEGFMVPADTFDNVRGQ FPIGFLVWDTSSILPKENPLNLGGNSKEEKQNSNLILDQDNLKDNPLKERFCLLDINAPNRKMCSQSRTRTKGTQKHSTA APFETPLHTVSLEIFDSFGGFLGSKKIYTHTIDKMLTLADYLQKFQPTKRDTIFGYLDPGRNSFQHQNLIHISIIDKSKQ SHVKYFPIIATTILLVSVFFSIRHCIKATWQNDRDQFYAPYDDAFQDDSEFKNNCLIFMLFHTQNRITTAQGTNHFIPFS ETEVNAKERYSSHALLEFLKGEIKELKENDSLFLSAKKENKPLKFSPSASKVFDASREVYRYYHTQDFTNRPYNANASLY DIKEFFQGRNKQGKLNLPAKAKDEYYKQLYANLQDALKDLAKEIQPKVYEYGFLRE
Sequences:
>Translated_856_residues MLSYKHSNATLPILWGEAKRGDFDDLDKAFTQLLLTIGKHRLYTHHTPPYLCAFNAFKMEFIAFDDTITSFFYKSDIDFS ITPSNHNTEGFKHALDAFKAMSKSHKFVFDFKTQSQECKEFIKNRLNSSHLLSKIQIDKNNFFTIYQKWLEIVKPTIDIN WEVAKTKDILDADYYLADLLSDGDKTIIEKLHTILRSSHYKLNRGVNELGKMDFMEVGFTDSQQAHQEFWSVYERPPKRE FQASILERRDLLVPSDVRERKGAFFTPKIWVEKSQEYLAKALGQDYQEDCIIWDCAGGTGNLLRGLLNKANLYLSTLDHN DVAIVKDLAAKNHLKLLENHVFQFDFLNDDFFSDKTPKSLQEILKDKEKRKKLIIYINPPYAEAGNKSKMSGTGEHKAKV ARDNLICEKYKNELGKANNEVFAQFFMRIYKELNGVILASFSTLKNLQGSNFKKFREIFKAKFLEGFMVPADTFDNVRGQ FPIGFLVWDTSSILPKENPLNLGGNSKEEKQNSNLILDQDNLKDNPLKERFCLLDINAPNRKMCSQSRTRTKGTQKHSTA APFETPLHTVSLEIFDSFGGFLGSKKIYTHTIDKMLTLADYLQKFQPTKRDTIFGYLDPGRNSFQHQNLIHISIIDKSKQ SHVKYFPIIATTILLVSVFFSIRHCIKATWQNDRDQFYAPYDDAFQDDSEFKNNCLIFMLFHTQNRITTAQGTNHFIPFS ETEVNAKERYSSHALLEFLKGEIKELKENDSLFLSAKKENKPLKFSPSASKVFDASREVYRYYHTQDFTNRPYNANASLY DIKEFFQGRNKQGKLNLPAKAKDEYYKQLYANLQDALKDLAKEIQPKVYEYGFLRE >Mature_856_residues MLSYKHSNATLPILWGEAKRGDFDDLDKAFTQLLLTIGKHRLYTHHTPPYLCAFNAFKMEFIAFDDTITSFFYKSDIDFS ITPSNHNTEGFKHALDAFKAMSKSHKFVFDFKTQSQECKEFIKNRLNSSHLLSKIQIDKNNFFTIYQKWLEIVKPTIDIN WEVAKTKDILDADYYLADLLSDGDKTIIEKLHTILRSSHYKLNRGVNELGKMDFMEVGFTDSQQAHQEFWSVYERPPKRE FQASILERRDLLVPSDVRERKGAFFTPKIWVEKSQEYLAKALGQDYQEDCIIWDCAGGTGNLLRGLLNKANLYLSTLDHN DVAIVKDLAAKNHLKLLENHVFQFDFLNDDFFSDKTPKSLQEILKDKEKRKKLIIYINPPYAEAGNKSKMSGTGEHKAKV ARDNLICEKYKNELGKANNEVFAQFFMRIYKELNGVILASFSTLKNLQGSNFKKFREIFKAKFLEGFMVPADTFDNVRGQ FPIGFLVWDTSSILPKENPLNLGGNSKEEKQNSNLILDQDNLKDNPLKERFCLLDINAPNRKMCSQSRTRTKGTQKHSTA APFETPLHTVSLEIFDSFGGFLGSKKIYTHTIDKMLTLADYLQKFQPTKRDTIFGYLDPGRNSFQHQNLIHISIIDKSKQ SHVKYFPIIATTILLVSVFFSIRHCIKATWQNDRDQFYAPYDDAFQDDSEFKNNCLIFMLFHTQNRITTAQGTNHFIPFS ETEVNAKERYSSHALLEFLKGEIKELKENDSLFLSAKKENKPLKFSPSASKVFDASREVYRYYHTQDFTNRPYNANASLY DIKEFFQGRNKQGKLNLPAKAKDEYYKQLYANLQDALKDLAKEIQPKVYEYGFLRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99280; Mature: 99280
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYKHSNATLPILWGEAKRGDFDDLDKAFTQLLLTIGKHRLYTHHTPPYLCAFNAFKME CCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHHHEEE FIAFDDTITSFFYKSDIDFSITPSNHNTEGFKHALDAFKAMSKSHKFVFDFKTQSQECKE EEEEHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH FIKNRLNSSHLLSKIQIDKNNFFTIYQKWLEIVKPTIDINWEVAKTKDILDADYYLADLL HHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHH SDGDKTIIEKLHTILRSSHYKLNRGVNELGKMDFMEVGFTDSQQAHQEFWSVYERPPKRE CCCHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHH FQASILERRDLLVPSDVRERKGAFFTPKIWVEKSQEYLAKALGQDYQEDCIIWDCAGGTG HHHHHHHHHCCCCCCCHHHHCCCEECCHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCH NLLRGLLNKANLYLSTLDHNDVAIVKDLAAKNHLKLLENHVFQFDFLNDDFFSDKTPKSL HHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHH QEILKDKEKRKKLIIYINPPYAEAGNKSKMSGTGEHKAKVARDNLICEKYKNELGKANNE HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH VFAQFFMRIYKELNGVILASFSTLKNLQGSNFKKFREIFKAKFLEGFMVPADTFDNVRGQ HHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC FPIGFLVWDTSSILPKENPLNLGGNSKEEKQNSNLILDQDNLKDNPLKERFCLLDINAPN CCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCC RKMCSQSRTRTKGTQKHSTAAPFETPLHTVSLEIFDSFGGFLGSKKIYTHTIDKMLTLAD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YLQKFQPTKRDTIFGYLDPGRNSFQHQNLIHISIIDKSKQSHVKYFPIIATTILLVSVFF HHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH SIRHCIKATWQNDRDQFYAPYDDAFQDDSEFKNNCLIFMLFHTQNRITTAQGTNHFIPFS HHHHHHHHHCCCCCCCEECCCCCCCCCCHHHCCCEEEEEEEECCCCEEECCCCCCCCCCC ETEVNAKERYSSHALLEFLKGEIKELKENDSLFLSAKKENKPLKFSPSASKVFDASREVY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHH RYYHTQDFTNRPYNANASLYDIKEFFQGRNKQGKLNLPAKAKDEYYKQLYANLQDALKDL HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKEIQPKVYEYGFLRE HHHHCCHHHHCCCCCC >Mature Secondary Structure MLSYKHSNATLPILWGEAKRGDFDDLDKAFTQLLLTIGKHRLYTHHTPPYLCAFNAFKME CCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHHHEEE FIAFDDTITSFFYKSDIDFSITPSNHNTEGFKHALDAFKAMSKSHKFVFDFKTQSQECKE EEEEHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH FIKNRLNSSHLLSKIQIDKNNFFTIYQKWLEIVKPTIDINWEVAKTKDILDADYYLADLL HHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHH SDGDKTIIEKLHTILRSSHYKLNRGVNELGKMDFMEVGFTDSQQAHQEFWSVYERPPKRE CCCHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHH FQASILERRDLLVPSDVRERKGAFFTPKIWVEKSQEYLAKALGQDYQEDCIIWDCAGGTG HHHHHHHHHCCCCCCCHHHHCCCEECCHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCH NLLRGLLNKANLYLSTLDHNDVAIVKDLAAKNHLKLLENHVFQFDFLNDDFFSDKTPKSL HHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHH QEILKDKEKRKKLIIYINPPYAEAGNKSKMSGTGEHKAKVARDNLICEKYKNELGKANNE HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH VFAQFFMRIYKELNGVILASFSTLKNLQGSNFKKFREIFKAKFLEGFMVPADTFDNVRGQ HHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC FPIGFLVWDTSSILPKENPLNLGGNSKEEKQNSNLILDQDNLKDNPLKERFCLLDINAPN CCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCC RKMCSQSRTRTKGTQKHSTAAPFETPLHTVSLEIFDSFGGFLGSKKIYTHTIDKMLTLAD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YLQKFQPTKRDTIFGYLDPGRNSFQHQNLIHISIIDKSKQSHVKYFPIIATTILLVSVFF HHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH SIRHCIKATWQNDRDQFYAPYDDAFQDDSEFKNNCLIFMLFHTQNRITTAQGTNHFIPFS HHHHHHHHHCCCCCCCEECCCCCCCCCCHHHCCCEEEEEEEECCCCEEECCCCCCCCCCC ETEVNAKERYSSHALLEFLKGEIKELKENDSLFLSAKKENKPLKFSPSASKVFDASREVY CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHH RYYHTQDFTNRPYNANASLYDIKEFFQGRNKQGKLNLPAKAKDEYYKQLYANLQDALKDL HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AKEIQPKVYEYGFLRE HHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA