| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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The map label for this gene is fliI
Identifier: 15646029
GI number: 15646029
Start: 1489685
End: 1490989
Strand: Reverse
Name: fliI
Synonym: HP1420
Alternate gene names: 15646029
Gene position: 1490989-1489685 (Counterclockwise)
Preceding gene: 15646030
Following gene: 15646028
Centisome position: 89.39
GC content: 45.44
Gene sequence:
>1305_bases ATGCCCCTAAAATCCTTAAAAAACCGCTTGAATCAGCATTTTGATCTATCGCCTCGCTATGGGAGCGTGAAAAAAATCAT GCCCAATATCGTTTATGCGGATGGTTTTAACCCGTCTGTGGGCGATGTGGTGAAGATTGAAAAAAGCGATGGCAGCGAAT GCGTGGGAATGGTGGTGGTGGCAGAAAAAGAGCAGTTTGGTTTTACGCCCTTTAACTTTATAGAGGGGGCTAGGGCTGGC GATAAGGTGCTGTTTTTAAAAGAGGGGTTGAATTTTCCTGTGGGCCGTAATCTTTTAGGGAGGGTGCTTAACCCTTTAGG GCAAGTCATTGACAATAAGGGGGCGCTAGATTATGAACGATTAGCGCCTGTCATTACAACGCCTATAGCCCCTTTAAAAA GAGGCTTGATTGATGAGATTTTTAGCGTGGGGGTGAAGAGCATTGATGGGCTTTTGACTTGCGGTAAGGGGCAAAAACTG GGCATTTTTGCCGGCTCTGGGGTGGGTAAATCCACGCTAATGGGCATGATCACTAGGGGTTGCTTAGCGCCTATTAAAGT GATCGCTTTGATTGGGGAAAGGGGCAGAGAAATCCCTGAATTTATAGAGAAAAACTTAAAAGGGGATTTAAGCTCTTGCG TGTTGGTGGTCGCTACGAGCGATGATAGCCCTTTGATGCGGAAATACGGGGCCTTTTGCGCGATGAGCGTGGCGGAGTAT TTTAAAAACCAAGGGCTAGACGTGTTGTTTATCATGGATTCAGTGACTCGTTTCGCTATGGCTCAAAGAGAAATCGGCTT AGCCTTAGGCGAACCGCCCACTTCCAAAGGCTACCCCCCATCCGCGCTTTCCTTATTGCCTCAATTGATGGAGAGAGCGG GTAAGGAAGAAAATAAGGGGAGCATTACGGCTTTTTTTAGCGTGCTAGTAGAGGGCGATGATTTGAGCGATCCCATAGCC GATCAGACCAGGAGTATTTTAGACGGGCATATCGTCTTAAGCAGGGAATTGACCGATTATGGGATCTACCCGCCTATTAA TATTTTAAACTCCGCATCAAGGGTGGCTAAAGACATCATCAGCGAGTCTCAAAACCTTTGCGCGAGAAAATTCCGCCGTT TGTATGCGTTATTGAAAGAAAATGAAATGCTCATTCGCATCGGATCTTATCAAATGGGGAACGATAAAGAGCTTGATGAA GCGATTAAGAAAAAGGCTCTAATGGAGCAATTTTTAGCGCAAGATGAAAACGCTTTGCAGCCTTTTGAAACAAGCTTTCA GCAATTAGAAGAAATCTTAAGATAA
Upstream 100 bases:
>100_bases GCGAGCGTATTTTAAGAGCGCGATTGATGTGATCGTGCATGTGAATAGAATCAACAATGAGCGCCAAATCGCTGAAGTCT TATGGACTAAAGAGCTTTAA
Downstream 100 bases:
>100_bases AAGGAATATCATGGAATCACAACTCATGAAACTCGCCATTGAGACTTATAAAATCACTTTGATGATTTCTTTACCGGTAT TACTAGCGGGATTAGTGGTG
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MPLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAG DKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKL GIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEY FKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKGSITAFFSVLVEGDDLSDPIA DQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDE AIKKKALMEQFLAQDENALQPFETSFQQLEEILR
Sequences:
>Translated_434_residues MPLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAG DKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKL GIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEY FKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKGSITAFFSVLVEGDDLSDPIA DQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDE AIKKKALMEQFLAQDENALQPFETSFQQLEEILR >Mature_433_residues PLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGD KVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLG IFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYF KNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKGSITAFFSVLVEGDDLSDPIAD QTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDEA IKKKALMEQFLAQDENALQPFETSFQQLEEILR
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=364, Percent_Identity=33.2417582417582, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI19913428, Length=449, Percent_Identity=28.2850779510022, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI19913426, Length=342, Percent_Identity=29.2397660818713, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI50345984, Length=350, Percent_Identity=28, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4757810, Length=350, Percent_Identity=28, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI19913424, Length=231, Percent_Identity=28.1385281385281, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1788251, Length=431, Percent_Identity=43.1554524361949, Blast_Score=317, Evalue=8e-88, Organism=Escherichia coli, GI1790170, Length=346, Percent_Identity=30.9248554913295, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1790172, Length=339, Percent_Identity=29.4985250737463, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25144756, Length=376, Percent_Identity=31.6489361702128, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17570191, Length=382, Percent_Identity=29.3193717277487, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17510931, Length=381, Percent_Identity=26.7716535433071, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988080, Length=370, Percent_Identity=26.2162162162162, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71988063, Length=370, Percent_Identity=26.2162162162162, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71988074, Length=320, Percent_Identity=25.3125, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17565854, Length=226, Percent_Identity=30.0884955752212, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322581, Length=356, Percent_Identity=31.1797752808989, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319603, Length=382, Percent_Identity=31.151832460733, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6319370, Length=388, Percent_Identity=27.8350515463918, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6320016, Length=189, Percent_Identity=32.2751322751323, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24638766, Length=364, Percent_Identity=33.5164835164835, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI28574560, Length=353, Percent_Identity=33.7110481586402, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI281361666, Length=377, Percent_Identity=28.3819628647215, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24646341, Length=377, Percent_Identity=28.3819628647215, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17136796, Length=377, Percent_Identity=28.3819628647215, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24658560, Length=372, Percent_Identity=27.9569892473118, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI20129479, Length=319, Percent_Identity=26.6457680250784, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24583988, Length=231, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24583986, Length=231, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24583984, Length=231, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24583992, Length=306, Percent_Identity=27.4509803921569, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 47637; Mature: 47506
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSDGSECVGMVVV CCHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEEE AEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYER EECHHCCCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHH CLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEY HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKG HHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC SITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH SESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQ HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PFETSFQQLEEILR HHHHHHHHHHHHHC >Mature Secondary Structure PLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSDGSECVGMVVV CHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEEE AEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYER EECHHCCCCCHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LAPVITTPIAPLKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHH CLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEY HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH FKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKG HHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC SITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDII HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH SESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQ HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PFETSFQQLEEILR HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]