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Identifier: 15646030

GI number: 15646030

Start: 1490990

End: 1491904

Strand: Reverse

Name: Not Available

Synonym: HP1421

Alternate gene names: 15646030

Gene position: 1491904-1490990 (Counterclockwise)

Preceding gene: 15646031

Following gene: 15646029

Centisome position: 89.45

GC content: 42.08

Gene sequence:

>915_bases
TTGAAAACTTTACAAACCCATAGAGTTTTACAAGCCCTAATTGGCCATTTTACCCCTTTTTTAGAAAGCGGGATCACAGA
GCTGATGATCAATACCGAGCAGGAGCTTTGGCTTTATAAAGTCAATAACACCCGAGAAAAAAGAGGGCATGCACTTTTTG
ATAAGGCGTTTTTGCTGAGGTTTTGCGAGCAATTGGCTAGTTTTAGGGGATTGTTTTTTGATGAAGAGCACCCCACCTTA
AATTGTTCTATCCCTTTCACGCGCTATAGGGTGAGCGCGAATCATTTTAGCATCACCACGAACAATCAAATCACGCTCAA
TATCCGTGTGCCTAGGCTTAAGCCCTTAAGTTTAGAGGATTTCACTTTCAAAGCAAGCGATCCAAAAAGTTTGAAAGATT
TAGCGCTTAAAGGGCATAACATTCTCATTAGCGGGGAGACTTCAAGCGGTAAAACAAGCCTATTAAACGCTCTTTTAGAT
TGCGTCAATAAAGACGAAAGGGTGGTGAGCGTTGAAGACAGCCAAGAATTGGATTTAAAAGCGTTTAGTAATTGCGTGGG
GCTTTTAGTGGGCAAGCAAGAAAACACGCGCTTTAATTATGAAGACGCTCTCAATATGGCCATGCGCTTAAACCCAGACA
GGCTCATTGTGGGCGAGATTGATACTAGGAATGCAGCGCTCTTTTTGCGTTTAGGAAACACCGGGCATAAGGGCATGCTC
TCAACTATTCACGCTAATAGCGCTCAAAACACTTTAGAAGCCCTTTCACTGAATTTAAGCATGCGTTACATGTATTCTTT
GGATAAGGATTTGATGCGAGCGTATTTTAAGAGCGCGATTGATGTGATCGTGCATGTGAATAGAATCAACAATGAGCGCC
AAATCGCTGAAGTCTTATGGACTAAAGAGCTTTAA

Upstream 100 bases:

>100_bases
AAATGCCCCAGGTGTTGGCGTTTTAAAAGCGAGCTAGAAAACACCCCTTGCAAGCGTTGCGAACAGGTTTTAAAAGAGCG
ATGATAAAAGGATAGGGCTT

Downstream 100 bases:

>100_bases
ATGCCCCTAAAATCCTTAAAAAACCGCTTGAATCAGCATTTTGATCTATCGCCTCGCTATGGGAGCGTGAAAAAAATCAT
GCCCAATATCGTTTATGCGG

Product: conjugative transfer regulon protein (trbB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGHALFDKAFLLRFCEQLASFRGLFFDEEHPTL
NCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKASDPKSLKDLALKGHNILISGETSSGKTSLLNALLD
CVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
STIHANSAQNTLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLWTKEL

Sequences:

>Translated_304_residues
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGHALFDKAFLLRFCEQLASFRGLFFDEEHPTL
NCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKASDPKSLKDLALKGHNILISGETSSGKTSLLNALLD
CVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
STIHANSAQNTLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLWTKEL
>Mature_304_residues
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGHALFDKAFLLRFCEQLASFRGLFFDEEHPTL
NCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKASDPKSLKDLALKGHNILISGETSSGKTSLLNALLD
CVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
STIHANSAQNTLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLWTKEL

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=145, Percent_Identity=35.1724137931034, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786296, Length=158, Percent_Identity=31.0126582278481, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34667; Mature: 34667

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGHALFDKAFLLR
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEEEECCCHHHCCHHHHHHHHHHH
FCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLED
HHHHHHHHCCCEECCCCCEEEEECCCEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCC
FTFKASDPKSLKDLALKGHNILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLK
EEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
AFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
HHHHHHEEEEECCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCEEEEEEECCCCCCCCE
STIHANSAQNTLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLW
EEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
TKEL
HCCC
>Mature Secondary Structure
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGHALFDKAFLLR
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEEEECCCHHHCCHHHHHHHHHHH
FCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLED
HHHHHHHHCCCEECCCCCEEEEECCCEEEEEECCEEEEEECCEEEEEEECCCCCCCCCCC
FTFKASDPKSLKDLALKGHNILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLK
EEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
AFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
HHHHHHEEEEECCCCCCCCHHHHHHHHEEECCCEEEEEECCCCCEEEEEEECCCCCCCCE
STIHANSAQNTLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLW
EEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
TKEL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]