| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15646011
GI number: 15646011
Start: 1464048
End: 1464755
Strand: Reverse
Name: Not Available
Synonym: HP1401
Alternate gene names: NA
Gene position: 1464755-1464048 (Counterclockwise)
Preceding gene: 15646012
Following gene: 15646008
Centisome position: 87.82
GC content: 36.86
Gene sequence:
>708_bases ATGAACGCTTATTGTTTGACTTTAAACGATACCAACATCGCCATAGAAAAAAAGGATATTAAGCATTTACACATTAGCGT TTGCCCGCCTGATGGCTCTGTGCATGTGTCTTGCCCCCTAGCTTTAAACGATGAGAGTCTCAGGCTTTCTTTGATCAAAA GACTCCATTGGATAAAAGAACAGCAACAAAATTTTTTAAACCAAAACAGACAAAGCCAAAGAGGAATGCTAGAAAGAGAA AGCCATTATCTTTTTGGGAAACGCTATTTGTTAAAGATTGAACACACCACAAAAAAACACTTCGTCCTCCAAAACCCTAA ATATTTAATCTTGCATGTCCATCAAAAAACAAGCTTAGAAAACCGCTTAAAAGTGTTAGAAAACTATTACAGACAAGTTT TAAGAGAGAAAATACAAACCTGCATCAACCGGTATGAAAAGATTTTAAACGAAAGCATACAAAGCTTTAAAATCCAAAAA ATGAAACGGATATGGGGGAGTTGCAACATTGCTAAACGCGCCTTGCTTTTCAATTTGGAATTGGCTAAAGTGCCTAGAAA GGGCATTGAATATGTGGTTGTGCATGAATTATTGCATTTAAAAACGCGCCACCATAACGAATATTTTAGGGATTTGCTGA GTTTGTATTTGCCCAATTGGCAAAGGGCTAAGGCCAGCCTCAAAGAAACTTATTTGGAGCGTTCTTAA
Upstream 100 bases:
>100_bases AAGAAAAAAACCTTAAAATCGCTTTAAGAAAAATCATAAACGATGAGGGTTTGTTAGAAAACACCTTCAATTTAGCCAAA CACATAGACGAGTATCATTA
Downstream 100 bases:
>100_bases ATGAAGATTTCATCATTTCAATAAAATCGCTAAGCGGCTAATTTGAGCGGCTCATCATCGCGCAATAACCCCCTCCTTTT TAAAGCCTTTAGAAAGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Phosphonate Metabolism Protein PhnI; Metal Dependent Hydrolases; Peptidase; Zinc Metallopeptidase
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNAYCLTLNDTNIAIEKKDIKHLHISVCPPDGSVHVSCPLALNDESLRLSLIKRLHWIKEQQQNFLNQNRQSQRGMLERE SHYLFGKRYLLKIEHTTKKHFVLQNPKYLILHVHQKTSLENRLKVLENYYRQVLREKIQTCINRYEKILNESIQSFKIQK MKRIWGSCNIAKRALLFNLELAKVPRKGIEYVVVHELLHLKTRHHNEYFRDLLSLYLPNWQRAKASLKETYLERS
Sequences:
>Translated_235_residues MNAYCLTLNDTNIAIEKKDIKHLHISVCPPDGSVHVSCPLALNDESLRLSLIKRLHWIKEQQQNFLNQNRQSQRGMLERE SHYLFGKRYLLKIEHTTKKHFVLQNPKYLILHVHQKTSLENRLKVLENYYRQVLREKIQTCINRYEKILNESIQSFKIQK MKRIWGSCNIAKRALLFNLELAKVPRKGIEYVVVHELLHLKTRHHNEYFRDLLSLYLPNWQRAKASLKETYLERS >Mature_235_residues MNAYCLTLNDTNIAIEKKDIKHLHISVCPPDGSVHVSCPLALNDESLRLSLIKRLHWIKEQQQNFLNQNRQSQRGMLERE SHYLFGKRYLLKIEHTTKKHFVLQNPKYLILHVHQKTSLENRLKVLENYYRQVLREKIQTCINRYEKILNESIQSFKIQK MKRIWGSCNIAKRALLFNLELAKVPRKGIEYVVVHELLHLKTRHHNEYFRDLLSLYLPNWQRAKASLKETYLERS
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28138; Mature: 28138
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAYCLTLNDTNIAIEKKDIKHLHISVCPPDGSVHVSCPLALNDESLRLSLIKRLHWIKE CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH QQQNFLNQNRQSQRGMLERESHYLFGKRYLLKIEHTTKKHFVLQNPKYLILHVHQKTSLE HHHHHHHCCHHHHHCHHHHHHHHEECCEEEEEEECCCCCEEEECCCCEEEEEEECCCCHH NRLKVLENYYRQVLREKIQTCINRYEKILNESIQSFKIQKMKRIWGSCNIAKRALLFNLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LAKVPRKGIEYVVVHELLHLKTRHHNEYFRDLLSLYLPNWQRAKASLKETYLERS HHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAYCLTLNDTNIAIEKKDIKHLHISVCPPDGSVHVSCPLALNDESLRLSLIKRLHWIKE CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH QQQNFLNQNRQSQRGMLERESHYLFGKRYLLKIEHTTKKHFVLQNPKYLILHVHQKTSLE HHHHHHHCCHHHHHCHHHHHHHHEECCEEEEEEECCCCCEEEECCCCEEEEEEECCCCHH NRLKVLENYYRQVLREKIQTCINRYEKILNESIQSFKIQKMKRIWGSCNIAKRALLFNLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LAKVPRKGIEYVVVHELLHLKTRHHNEYFRDLLSLYLPNWQRAKASLKETYLERS HHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA