| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645973
GI number: 15645973
Start: 1421605
End: 1422858
Strand: Reverse
Name: Not Available
Synonym: HP1361
Alternate gene names: NA
Gene position: 1422858-1421605 (Counterclockwise)
Preceding gene: 15645974
Following gene: 15645972
Centisome position: 85.31
GC content: 37.16
Gene sequence:
>1254_bases GTGTGTGGGGTGTTTTTAAGCCTTTTATTGGCGATTAACCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTC AAAACCTACAAGTTTGAGCGCTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGC TCCAATCAAAAAACATGATCTTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTT GGCAAAATCAAACCTTGCTCGTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAA ACAGGATTTCAAATCGCATTGGCGCCATTTCATTGACAGCGCTCATGAAAACGCTTTGGTGGGTAATTTATATCGCGCGT TATTTATAGGGGATAGCTTAAATAAAGACTTAAGGGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGC GGGTTCCATTTAGGGATTTTGAGCGTTAGCGTGTATTTTCTTTCCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTT CCCTTATAGGAACGCTTTTTATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGCTACTAGATTTTT TACCCTCTTTTTTCAGGGCGTTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTT AAACTTTTGATTTTAGCGTGCTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGT TTGTGGGGTGTGGTATATCTTCTTGTTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTT TTCAAGCCATAAGCTTAAGCGCGCTGGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCC TACCAGCTCTTTAGCATTCCTTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTT GGGGTCTTTGTTGGATCGCCTTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCCTTATGGCTTTTAG GGGTGCATTTATTTTTAACGATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTT TTCTTGTATTGTTGCTATCAATATATTATAATGCCTAGCTTAATTGTAGGTTAG
Upstream 100 bases:
>100_bases AAGGGCAAGAAACTAAAGTGGATTATGATATAGTTACAACTTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTA CGACCCCCAAAGAATACCTG
Downstream 100 bases:
>100_bases AAAAGTCATTTTATTAGGGATCAAATCATTGCTTAAAAAAATCACGCACAAAATCAAAGCTTTAAGCGAATTGGTCGCTT TGGAGCATACGATATTTTCT
Product: competence locus E (comE3)
Products: NA
Alternate protein names: ComEC/Rec2-Related Protein; Integral Membrane Protein; DNA Transfer Protein ComE; DNA Uptake Protein; ComEC/Rec2 Family Protein; Inner Membrane Protein OxaA; Competence Protein; Comec/Rec2-Related Protein; Competence Locus E
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF FLYCCYQYIIMPSLIVG
Sequences:
>Translated_417_residues MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF FLYCCYQYIIMPSLIVG >Mature_417_residues MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF FLYCCYQYIIMPSLIVG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47985; Mature: 47985
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEEECCCEE FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDS EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAISGFHLGILSVSVYFLSSLFYT HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEEECCCEE FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDS EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAISGFHLGILSVSVYFLSSLFYT HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA