Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645973

GI number: 15645973

Start: 1421605

End: 1422858

Strand: Reverse

Name: Not Available

Synonym: HP1361

Alternate gene names: NA

Gene position: 1422858-1421605 (Counterclockwise)

Preceding gene: 15645974

Following gene: 15645972

Centisome position: 85.31

GC content: 37.16

Gene sequence:

>1254_bases
GTGTGTGGGGTGTTTTTAAGCCTTTTATTGGCGATTAACCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTC
AAAACCTACAAGTTTGAGCGCTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGC
TCCAATCAAAAAACATGATCTTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTT
GGCAAAATCAAACCTTGCTCGTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAA
ACAGGATTTCAAATCGCATTGGCGCCATTTCATTGACAGCGCTCATGAAAACGCTTTGGTGGGTAATTTATATCGCGCGT
TATTTATAGGGGATAGCTTAAATAAAGACTTAAGGGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGC
GGGTTCCATTTAGGGATTTTGAGCGTTAGCGTGTATTTTCTTTCCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTT
CCCTTATAGGAACGCTTTTTATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGCTACTAGATTTTT
TACCCTCTTTTTTCAGGGCGTTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTT
AAACTTTTGATTTTAGCGTGCTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGT
TTGTGGGGTGTGGTATATCTTCTTGTTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTT
TTCAAGCCATAAGCTTAAGCGCGCTGGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCC
TACCAGCTCTTTAGCATTCCTTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTT
GGGGTCTTTGTTGGATCGCCTTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCCTTATGGCTTTTAG
GGGTGCATTTATTTTTAACGATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTT
TTCTTGTATTGTTGCTATCAATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Upstream 100 bases:

>100_bases
AAGGGCAAGAAACTAAAGTGGATTATGATATAGTTACAACTTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTA
CGACCCCCAAAGAATACCTG

Downstream 100 bases:

>100_bases
AAAAGTCATTTTATTAGGGATCAAATCATTGCTTAAAAAAATCACGCACAAAATCAAAGCTTTAAGCGAATTGGTCGCTT
TGGAGCATACGATATTTTCT

Product: competence locus E (comE3)

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Integral Membrane Protein; DNA Transfer Protein ComE; DNA Uptake Protein; ComEC/Rec2 Family Protein; Inner Membrane Protein OxaA; Competence Protein; Comec/Rec2-Related Protein; Competence Locus E

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF
GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS
GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP
YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF
FLYCCYQYIIMPSLIVG

Sequences:

>Translated_417_residues
MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF
GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS
GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP
YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF
FLYCCYQYIIMPSLIVG
>Mature_417_residues
MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMIFYTTIKEPLKNLQYRHAQFF
GKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS
GFHLGILSVSVYFLSSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLSALVFLNMLIIVHAFFPMFSP
YQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGF
FLYCCYQYIIMPSLIVG

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47985; Mature: 47985

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEEECCCEE
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDS
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAISGFHLGILSVSVYFLSSLFYT
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEEECCCEE
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDS
EEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHENALVGNLYRALFIGDSLNKDLRDRANALGINHLLAISGFHLGILSVSVYFLSSLFYT
HHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLMRSFQAISLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPTISVPSPLWLLGVHLFLTILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA