| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645788
GI number: 15645788
Start: 1240473
End: 1241696
Strand: Reverse
Name: Not Available
Synonym: HP1174
Alternate gene names: 15645788
Gene position: 1241696-1240473 (Counterclockwise)
Preceding gene: 15645789
Following gene: 15645782
Centisome position: 74.45
GC content: 42.48
Gene sequence:
>1224_bases ATGCAAAAAACTTCTAACACTCTGGCGCTGGGGAGTTTGACAGCGCTATTCTTTCTAATGGGTTTTATCACGGTTTTAAA CGATATTTTAATCCCACACTTAAAGCCCATTTTTGACTTGACCTATTTTGAAGCTTCACTCATTCAATTTTGCTTTTTTG GGGCGTATTTCATCATGGGAGGAGTTTTTGGGAATGTGATCAGTAAAATCGGCTACCCTTTTGGCGTGGTGCTTGGTTTT GTGATCACAGCGACGGGGTGCGCGTTGTTTTATCCGGCGGCGCATTTTGGATCCTATGGGTTTTTTTTAGGAGCGTTGTT TATTTTAGCGAGCGGGATTGTGTGCTTGCAAACCGCTGGTAATCCCTTTGTAACCTTGCTTTCTAAAGGTAAAGAAGCCA GAAATTTGGTTTTAGTCCAGGCGTTCAATTCGCTTGGCACAACTTTAGGGCCTATTTTTGGGAGCTTGTTGATTTTTAGC ACGACTAAAATGGGCGATAATGCAAGTTTGATAGATAAATTAGCGGACGCTAAAAGCGTTCAAATGCCTTATTTGGGCTT GGCGGTGTTTTCGCTTCTTTTAGCGCTCATCATGTATCTTTTGAAATTGCCTGATGTGGAAAAAGAAATGCCCAAAGAGA CGACTCAAAAAAGCTTGTTTTCGCACAAACACTTTGTTTTTGGGGCTTTGGGGATCTTTTTTTATGTGGGGGGAGAAGTG GCGATTGGCTCATTCTTGGTGCTAAGCTTTGAAAAGCTTTTGAATTTAGACTCTCAATCAAGCGCGCATTACTTGGTGTA TTATTGGGGAGGCGCGATGGTGGGCCGTTTCTTAGGCAGTGTGTTGATGAATAAAATTGCCCCTAATAAATACTTGGCTT TCAACGCCTTAAGCTCTATTGTTCTCATCGCTTTAGCCATTATCATTGGAGGCAAGATCGCTTTATTCGCTCTGACTTTT GTGGGCTTTTTCAACTCTATCATGTTCCCTACCATCTTTTCTTTGGCTACGCTCAATTTAGGGCATCTCACTTCTAAAGC TTCTGGGGTGATTAGCATGGCGATTGTGGGAGGGGCGTTAATCCCCCCCATTCAAGGTGCGGTTACAGACATGCTAACAG CAACCGAATCAAATTTGCTCTACGCTTATGGTGTGCCGTTGTTGTGCTATTTTTATATTCTCTTCTTTGCGCTTAAAGGG TATAAGCAAGAAGAAAACTCCTAA
Upstream 100 bases:
>100_bases ACTCATTTCATGCCTCTTTTTCTTTATTTAGACAGATTATTATCTTAAAATAATTGTAATATCATTATTATTATATCAAC TCAATAAAAAAGGAGAAGGT
Downstream 100 bases:
>100_bases AAAAAGGGGGGGTTTCTTTCTTCTTTCCTTTCTTTTATCTTGTTTTAAAAATCAGTAATAAAGAACTTGACTTTAATCAA GCAAGCACTCTATAAAAGGT
Product: glucose/galactose transporter (gluP)
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQKTSNTLALGSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITATGCALFYPAAHFGSYGFFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNASLIDKLADAKSVQMPYLGLAVFSLLLALIMYLLKLPDVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV AIGSFLVLSFEKLLNLDSQSSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAIIIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGAVTDMLTATESNLLYAYGVPLLCYFYILFFALKG YKQEENS
Sequences:
>Translated_407_residues MQKTSNTLALGSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITATGCALFYPAAHFGSYGFFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNASLIDKLADAKSVQMPYLGLAVFSLLLALIMYLLKLPDVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV AIGSFLVLSFEKLLNLDSQSSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAIIIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGAVTDMLTATESNLLYAYGVPLLCYFYILFFALKG YKQEENS >Mature_407_residues MQKTSNTLALGSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMGGVFGNVISKIGYPFGVVLGF VITATGCALFYPAAHFGSYGFFLGALFILASGIVCLQTAGNPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFS TTKMGDNASLIDKLADAKSVQMPYLGLAVFSLLLALIMYLLKLPDVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV AIGSFLVLSFEKLLNLDSQSSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSIVLIALAIIIGGKIALFALTF VGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGALIPPIQGAVTDMLTATESNLLYAYGVPLLCYFYILFFALKG YKQEENS
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=419, Percent_Identity=36.0381861575179, Blast_Score=223, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43951; Mature: 43951
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTSNTLALGSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFGNVISKIGYPFGVVLGFVITATGCALFYPAAHFGSYGFFLGALFILASGIVCLQTAG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHEEECCC NPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFSTTKMGDNASLIDKLADAKSV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC QMPYLGLAVFSLLLALIMYLLKLPDVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIGSFLVLSFEKLLNLDSQSSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLIALAIIIGGKIALFALTFVGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC IPPIQGAVTDMLTATESNLLYAYGVPLLCYFYILFFALKGYKQEENS CCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQKTSNTLALGSLTALFFLMGFITVLNDILIPHLKPIFDLTYFEASLIQFCFFGAYFIMG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFGNVISKIGYPFGVVLGFVITATGCALFYPAAHFGSYGFFLGALFILASGIVCLQTAG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHEEECCC NPFVTLLSKGKEARNLVLVQAFNSLGTTLGPIFGSLLIFSTTKMGDNASLIDKLADAKSV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC QMPYLGLAVFSLLLALIMYLLKLPDVEKEMPKETTQKSLFSHKHFVFGALGIFFYVGGEV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIGSFLVLSFEKLLNLDSQSSAHYLVYYWGGAMVGRFLGSVLMNKIAPNKYLAFNALSSI HHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLIALAIIIGGKIALFALTFVGFFNSIMFPTIFSLATLNLGHLTSKASGVISMAIVGGAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC IPPIQGAVTDMLTATESNLLYAYGVPLLCYFYILFFALKGYKQEENS CCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]