Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645789

GI number: 15645789

Start: 1241825

End: 1243132

Strand: Reverse

Name: Not Available

Synonym: HP1175

Alternate gene names: 15645789

Gene position: 1243132-1241825 (Counterclockwise)

Preceding gene: 15645790

Following gene: 15645788

Centisome position: 74.53

GC content: 44.19

Gene sequence:

>1308_bases
ATGGGGTTTTTCAAGCTTAAAGAACACAACACTAACATTGCCACCGAGTTTAGAGCGGGTTTAACGACCTTTATCACCAT
GATTTACATCGTGCCCTTAAACGCTCTTATCCTTTCTCAAGCCAACATGCCTTATGAAGCCCTTTTAAGTGCAACGGCCA
TTATCACTATCTTATCGAGCGTGTTTAACGGATTGTGGGCAAACACCCCTATCGCTATGAGCGTGGGCTTAGGGCTGTCA
GCTTATTTTAGCTTCGGGTTGGTTCAAGGGTTAAAACTCCCTTGGCAGAGCGCTTTAGGCATCGTAGCGCTCTCGGGAGC
GATTTTTGTGATTTTGTCTTTCACTAAATTTAGAAGTTGGGTCATGCGAAGCATTCCTAGCGATTTAAGGCGTGCGGTGA
GTGCGGGGATAGGGGCTTTTATCGCGTTTATTGGCCTTAAAGAAATGCATATCGTCGTTACCCATAAGGCTACGCTTGTA
ACCTTAGGCGATTTTGGCGATCCGCATGTGTTATTGGGGGTTGTGGGGATCATTCTAACTTTCGCGCTCTACACGCTCAA
AATCAGGGGTTCTTTCATTATAGCGGTCTTAATCACTTCCATTCTCGCATGGGTTTTAAAGCTAGCCCCTTACCCTAGCG
AGTTTTTTTCCATGCCCGCTAGCATTGGCCCTATCGCCTTTCAATTAGACTTTAAGGGCATTTTTTTTGATGCGAGTGGG
GCTTTCACTTTAGCGTTAGTGCCAGTTATTATCACTTTTTTTGTAACCGATTTGTTTGATTCTTTAGGCACGCTTGCAGG
GATTGGCCACAAGACTGATTTTTTCAATGATGAAGAAAAAAACAAGGAATTGGAAAAGACTTTGGAAGCGGATGCGGTGG
CTTCTTTAGGGAGCGCGGTGGTGGGCGTTTCTACTACGACCGCTTTTATAGAGAGCGCGAGTGGGGTTGAAGAGGGGGGC
CGCACAGGGCTTACAGCGGTTTTTACCGGATTATTTTTTGTTTTAACGCTCTTTTGCTTGCCTCTTTTAAAAGCTATTCC
TAGCAATGCGATTTATCCGGTGCTGGTGGTAGTAGGGGTTTTGATGTTTAGCGTGTTAGAGGGGGTGAATTTTAAAGACA
TGGCCATTAGCGTTTCCACTTTTTTAACCGTGGTGATGATGCCCTTAACCTTCTCCATTGCCGATGGCTTAGCCTTTGGC
TTTTTGTCTTATAGTATCATCAAATTGGTTCAAAAAGACTTCAAAGCACTCAATTCAGGCATTATCATTCTCTGCATCAT
TTCTGTTTCTGTATTTATCTTTCGTTAA

Upstream 100 bases:

>100_bases
AATCAAGCATCTTAAGGCAATTTAAAATAAAATAGCGCTAGCATGACCCTAAAGCCCCTTATTAAATTAATCTATACCAA
ATAGTAAGGAGTTATCTAAC

Downstream 100 bases:

>100_bases
GCTCTTTTTAAGGGGCTTTGCATTTTTTACTCATTTCATGCCTCTTTTTCTTTATTTAGACAGATTATTATCTTAAAATA
ATTGTAATATCATTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MGFFKLKEHNTNIATEFRAGLTTFITMIYIVPLNALILSQANMPYEALLSATAIITILSSVFNGLWANTPIAMSVGLGLS
AYFSFGLVQGLKLPWQSALGIVALSGAIFVILSFTKFRSWVMRSIPSDLRRAVSAGIGAFIAFIGLKEMHIVVTHKATLV
TLGDFGDPHVLLGVVGIILTFALYTLKIRGSFIIAVLITSILAWVLKLAPYPSEFFSMPASIGPIAFQLDFKGIFFDASG
AFTLALVPVIITFFVTDLFDSLGTLAGIGHKTDFFNDEEKNKELEKTLEADAVASLGSAVVGVSTTTAFIESASGVEEGG
RTGLTAVFTGLFFVLTLFCLPLLKAIPSNAIYPVLVVVGVLMFSVLEGVNFKDMAISVSTFLTVVMMPLTFSIADGLAFG
FLSYSIIKLVQKDFKALNSGIIILCIISVSVFIFR

Sequences:

>Translated_435_residues
MGFFKLKEHNTNIATEFRAGLTTFITMIYIVPLNALILSQANMPYEALLSATAIITILSSVFNGLWANTPIAMSVGLGLS
AYFSFGLVQGLKLPWQSALGIVALSGAIFVILSFTKFRSWVMRSIPSDLRRAVSAGIGAFIAFIGLKEMHIVVTHKATLV
TLGDFGDPHVLLGVVGIILTFALYTLKIRGSFIIAVLITSILAWVLKLAPYPSEFFSMPASIGPIAFQLDFKGIFFDASG
AFTLALVPVIITFFVTDLFDSLGTLAGIGHKTDFFNDEEKNKELEKTLEADAVASLGSAVVGVSTTTAFIESASGVEEGG
RTGLTAVFTGLFFVLTLFCLPLLKAIPSNAIYPVLVVVGVLMFSVLEGVNFKDMAISVSTFLTVVMMPLTFSIADGLAFG
FLSYSIIKLVQKDFKALNSGIIILCIISVSVFIFR
>Mature_434_residues
GFFKLKEHNTNIATEFRAGLTTFITMIYIVPLNALILSQANMPYEALLSATAIITILSSVFNGLWANTPIAMSVGLGLSA
YFSFGLVQGLKLPWQSALGIVALSGAIFVILSFTKFRSWVMRSIPSDLRRAVSAGIGAFIAFIGLKEMHIVVTHKATLVT
LGDFGDPHVLLGVVGIILTFALYTLKIRGSFIIAVLITSILAWVLKLAPYPSEFFSMPASIGPIAFQLDFKGIFFDASGA
FTLALVPVIITFFVTDLFDSLGTLAGIGHKTDFFNDEEKNKELEKTLEADAVASLGSAVVGVSTTTAFIESASGVEEGGR
TGLTAVFTGLFFVLTLFCLPLLKAIPSNAIYPVLVVVGVLMFSVLEGVNFKDMAISVSTFLTVVMMPLTFSIADGLAFGF
LSYSIIKLVQKDFKALNSGIIILCIISVSVFIFR

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=427, Percent_Identity=37.9391100702576, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI1790150, Length=424, Percent_Identity=37.9716981132075, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1790499, Length=432, Percent_Identity=30.787037037037, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI48994909, Length=424, Percent_Identity=30.188679245283, Blast_Score=199, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46737; Mature: 46606

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFKLKEHNTNIATEFRAGLTTFITMIYIVPLNALILSQANMPYEALLSATAIITILSS
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VFNGLWANTPIAMSVGLGLSAYFSFGLVQGLKLPWQSALGIVALSGAIFVILSFTKFRSW
HHHHHHCCCCHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRSIPSDLRRAVSAGIGAFIAFIGLKEMHIVVTHKATLVTLGDFGDPHVLLGVVGIILT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEEEECCCCCHHHHHHHHHHHHH
FALYTLKIRGSFIIAVLITSILAWVLKLAPYPSEFFSMPASIGPIAFQLDFKGIFFDASG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECEEEEECCC
AFTLALVPVIITFFVTDLFDSLGTLAGIGHKTDFFNDEEKNKELEKTLEADAVASLGSAV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
VGVSTTTAFIESASGVEEGGRTGLTAVFTGLFFVLTLFCLPLLKAIPSNAIYPVLVVVGV
HCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LMFSVLEGVNFKDMAISVSTFLTVVMMPLTFSIADGLAFGFLSYSIIKLVQKDFKALNSG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IIILCIISVSVFIFR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
GFFKLKEHNTNIATEFRAGLTTFITMIYIVPLNALILSQANMPYEALLSATAIITILSS
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VFNGLWANTPIAMSVGLGLSAYFSFGLVQGLKLPWQSALGIVALSGAIFVILSFTKFRSW
HHHHHHCCCCHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMRSIPSDLRRAVSAGIGAFIAFIGLKEMHIVVTHKATLVTLGDFGDPHVLLGVVGIILT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEEEEECCCCCHHHHHHHHHHHHH
FALYTLKIRGSFIIAVLITSILAWVLKLAPYPSEFFSMPASIGPIAFQLDFKGIFFDASG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECEEEEECCC
AFTLALVPVIITFFVTDLFDSLGTLAGIGHKTDFFNDEEKNKELEKTLEADAVASLGSAV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
VGVSTTTAFIESASGVEEGGRTGLTAVFTGLFFVLTLFCLPLLKAIPSNAIYPVLVVVGV
HCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LMFSVLEGVNFKDMAISVSTFLTVVMMPLTFSIADGLAFGFLSYSIIKLVQKDFKALNSG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IIILCIISVSVFIFR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]