| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645671
GI number: 15645671
Start: 1119040
End: 1119762
Strand: Reverse
Name: Not Available
Synonym: HP1057
Alternate gene names: NA
Gene position: 1119762-1119040 (Counterclockwise)
Preceding gene: 15645680
Following gene: 15645670
Centisome position: 67.14
GC content: 38.59
Gene sequence:
>723_bases TTGGGTCTTAAAAAATATGCTATTTTATGGTCTTTAATGGGGTTTTATGCAGGATTGAACGCGCTTGATTATGACACCAT AGACCCAAAATACTACAAGTATATCAAGTATTATAAAGCCTATGAGGATAAAGAAGTTGAAGAATTGATCAGAGACTTAA AAAGGGCGAACGCTAAAAGCGGGCTTATTTTAGGGATCAATACCGGGTTTTTTTACAATCATGAAATCATGGTTAGAACT AATAGCTCTAGCATCACGGGGAATATTTTAAATTATTTGTTCGCTTACGGCTTGCGTTTTGGCTATCAAACTTTCAGGCC GTCGTTTTTTGCGCGCTTGGTCAAGCCAAATATCATTGGCAGGCGCATTTATATCCAATATTATGGAGGAGCTCCTAAAA AAGCGGGCTTTGGGGATGTAGGGTTTCAATCGGTTATGCTGAATGGGGATTTTTTATTGGATTTTCCTTTGCCTTTTGTG GGGAAATACCTTTATATGGGGGGTTATATGGGTTTAGGTTTGGGGGTTGTAGCGCATGGGGTGAATTACACGGCGGAATG GGGGATGTCTTTTAACGCAGGATTGGCTCTAACGGTATTAGAAAAAAACCGCATTGAATTTGGATTTAAAATTTTGAATA ATTTCCCTTTTTTGCAATCTAATTCTTCAAAAGAGACTTGGTGGGGAGCTATGGCAAACATTGGGTATCAATATGTGTTC TAA
Upstream 100 bases:
>100_bases AGGGTGGGTAAAAATTTTACTCCATTTTAACCGGTCATTTTAATTATTTTAGTATAATTGAAAGAAACTTTTAACAAACA ATTCAAGGGATTTGGCGATT
Downstream 100 bases:
>100_bases AAAAATAAGAAATCTCATTTTATGCTTTGGTTTTATGTTGGGCTTGCACGCTGAAGAAAATACGACTGAAGGAAATATGA CTGAAGAAAATATCTCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGLKKYAILWSLMGFYAGLNALDYDTIDPKYYKYIKYYKAYEDKEVEELIRDLKRANAKSGLILGINTGFFYNHEIMVRT NSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVKPNIIGRRIYIQYYGGAPKKAGFGDVGFQSVMLNGDFLLDFPLPFV GKYLYMGGYMGLGLGVVAHGVNYTAEWGMSFNAGLALTVLEKNRIEFGFKILNNFPFLQSNSSKETWWGAMANIGYQYVF
Sequences:
>Translated_240_residues MGLKKYAILWSLMGFYAGLNALDYDTIDPKYYKYIKYYKAYEDKEVEELIRDLKRANAKSGLILGINTGFFYNHEIMVRT NSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVKPNIIGRRIYIQYYGGAPKKAGFGDVGFQSVMLNGDFLLDFPLPFV GKYLYMGGYMGLGLGVVAHGVNYTAEWGMSFNAGLALTVLEKNRIEFGFKILNNFPFLQSNSSKETWWGAMANIGYQYVF >Mature_239_residues GLKKYAILWSLMGFYAGLNALDYDTIDPKYYKYIKYYKAYEDKEVEELIRDLKRANAKSGLILGINTGFFYNHEIMVRTN SSSITGNILNYLFAYGLRFGYQTFRPSFFARLVKPNIIGRRIYIQYYGGAPKKAGFGDVGFQSVMLNGDFLLDFPLPFVG KYLYMGGYMGLGLGVVAHGVNYTAEWGMSFNAGLALTVLEKNRIEFGFKILNNFPFLQSNSSKETWWGAMANIGYQYVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27390; Mature: 27259
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKKYAILWSLMGFYAGLNALDYDTIDPKYYKYIKYYKAYEDKEVEELIRDLKRANAKS CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GLILGINTGFFYNHEIMVRTNSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVKPNIIG CEEEEEECCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCEEC RRIYIQYYGGAPKKAGFGDVGFQSVMLNGDFLLDFPLPFVGKYLYMGGYMGLGLGVVAHG EEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHC VNYTAEWGMSFNAGLALTVLEKNRIEFGFKILNNFPFLQSNSSKETWWGAMANIGYQYVF CCCEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEEECC >Mature Secondary Structure GLKKYAILWSLMGFYAGLNALDYDTIDPKYYKYIKYYKAYEDKEVEELIRDLKRANAKS CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC GLILGINTGFFYNHEIMVRTNSSSITGNILNYLFAYGLRFGYQTFRPSFFARLVKPNIIG CEEEEEECCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCCCEEC RRIYIQYYGGAPKKAGFGDVGFQSVMLNGDFLLDFPLPFVGKYLYMGGYMGLGLGVVAHG EEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHC VNYTAEWGMSFNAGLALTVLEKNRIEFGFKILNNFPFLQSNSSKETWWGAMANIGYQYVF CCCEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA