| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645670
GI number: 15645670
Start: 1118208
End: 1119062
Strand: Reverse
Name: Not Available
Synonym: HP1056
Alternate gene names: NA
Gene position: 1119062-1118208 (Counterclockwise)
Preceding gene: 15645671
Following gene: 15645669
Centisome position: 67.1
GC content: 36.02
Gene sequence:
>855_bases TTGGGTATCAATATGTGTTCTAAAAAAATAAGAAATCTCATTTTATGCTTTGGTTTTATGTTGGGCTTGCACGCTGAAGA AAATACGACTGAAGGAAATATGACTGAAGAAAATATCTCTAAAGACGCTCCCATTCTTTTGGAAGAAAAACGCGCCCAAA CGCTAGAATTTAAAGAAGAAAAGGAAGCTAAAAAGAATATTGATGAAAAAAGCCTGCTTGAAGAAATCCATAAGAAAAAA CGCCAACTTTACATGCTCAAAGGGGAATTGCATGAAAAAAATGAATCTCTCTTGTTCCAACGAATGGCTAAAAATAAGAG CGGTTTTTTTATAGGCGTAATCCTTGGCGATATAGGGGTTAGCGCTCATTCTTATGAGAAGTTTGAACTTTTAAGCAATA TTCAAGCTTCTCCTTTGTTGTATGGCTTAAGGAGCGGGTATCAAAAGTATTTTGCTAACGGGATTAGCGCCTTACGCTTT TATGGGGAGTATTTAGGGGGGGCGATGAAAGGATTTAAAAGCGATTCTTTAGCCTCTTATCAAACCGCAAGCTTGAACAT TGATTTGTTGATGGATAAGCCTATTGACAAAGAAAAAAGGTTTGCGTTAGGGATATTTGGAGGCGTTGGAGTGGGGTGGA ATGGGATGTATCAAAATTTAAAAGAGGTTAAAGGGTATTCACAGCCTAACGCTTTTGGATTAGTGCTAAATTTAGGGGTG AGCATGACGCTTAACCTCAAACACCGCTTTGAATTAGCCTTAAAAATGCCTCCCTTAAAAGAAACTTCGCAAACCTTTTT ATATTATTTTAAAAGCACTAATATTTATTATATTAGTTACAACTATTTATTGTAA
Upstream 100 bases:
>100_bases GAAAAAAACCGCATTGAATTTGGATTTAAAATTTTGAATAATTTCCCTTTTTTGCAATCTAATTCTTCAAAAGAGACTTG GTGGGGAGCTATGGCAAACA
Downstream 100 bases:
>100_bases AGGCTAAAATGTTGAAATTTAAATATGGTTTGATTTATATCGCGCTCATACTAGGACTTCAAGCGACAGATTATGACAAT TTAGAAGAAGAAAACCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGINMCSKKIRNLILCFGFMLGLHAEENTTEGNMTEENISKDAPILLEEKRAQTLEFKEEKEAKKNIDEKSLLEEIHKKK RQLYMLKGELHEKNESLLFQRMAKNKSGFFIGVILGDIGVSAHSYEKFELLSNIQASPLLYGLRSGYQKYFANGISALRF YGEYLGGAMKGFKSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEVKGYSQPNAFGLVLNLGV SMTLNLKHRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL
Sequences:
>Translated_284_residues MGINMCSKKIRNLILCFGFMLGLHAEENTTEGNMTEENISKDAPILLEEKRAQTLEFKEEKEAKKNIDEKSLLEEIHKKK RQLYMLKGELHEKNESLLFQRMAKNKSGFFIGVILGDIGVSAHSYEKFELLSNIQASPLLYGLRSGYQKYFANGISALRF YGEYLGGAMKGFKSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEVKGYSQPNAFGLVLNLGV SMTLNLKHRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL >Mature_283_residues GINMCSKKIRNLILCFGFMLGLHAEENTTEGNMTEENISKDAPILLEEKRAQTLEFKEEKEAKKNIDEKSLLEEIHKKKR QLYMLKGELHEKNESLLFQRMAKNKSGFFIGVILGDIGVSAHSYEKFELLSNIQASPLLYGLRSGYQKYFANGISALRFY GEYLGGAMKGFKSDSLASYQTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEVKGYSQPNAFGLVLNLGVS MTLNLKHRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32341; Mature: 32210
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINMCSKKIRNLILCFGFMLGLHAEENTTEGNMTEENISKDAPILLEEKRAQTLEFKEE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEECCHHHHHHHHHH KEAKKNIDEKSLLEEIHKKKRQLYMLKGELHEKNESLLFQRMAKNKSGFFIGVILGDIGV HHHHHCCCHHHHHHHHHHHHHHEEEHHCHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCC SAHSYEKFELLSNIQASPLLYGLRSGYQKYFANGISALRFYGEYLGGAMKGFKSDSLASY CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE QTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEVKGYSQPNAFGLVLNLGV EEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCC SMTLNLKHRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL EEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEECC >Mature Secondary Structure GINMCSKKIRNLILCFGFMLGLHAEENTTEGNMTEENISKDAPILLEEKRAQTLEFKEE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEECCHHHHHHHHHH KEAKKNIDEKSLLEEIHKKKRQLYMLKGELHEKNESLLFQRMAKNKSGFFIGVILGDIGV HHHHHCCCHHHHHHHHHHHHHHEEEHHCHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCC SAHSYEKFELLSNIQASPLLYGLRSGYQKYFANGISALRFYGEYLGGAMKGFKSDSLASY CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE QTASLNIDLLMDKPIDKEKRFALGIFGGVGVGWNGMYQNLKEVKGYSQPNAFGLVLNLGV EEEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCC SMTLNLKHRFELALKMPPLKETSQTFLYYFKSTNIYYISYNYLL EEEEEEEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA