| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645591
GI number: 15645591
Start: 1037710
End: 1039020
Strand: Reverse
Name: Not Available
Synonym: HP0976
Alternate gene names: 15645591
Gene position: 1039020-1037710 (Counterclockwise)
Preceding gene: 15645600
Following gene: 15645587
Centisome position: 62.3
GC content: 39.59
Gene sequence:
>1311_bases ATGAATTTTCAAGAAAATTTAGCCGCTTTGGATTTGGAGTATCTTTGGCACCCTTGTTCGCAAATGCAAGAGCATCAAAA TTTCCCCATTATCCCCATTAAAAAGGCTCAAGGGATTTACCTCTATGATTTTAATGATAACGCTTACATGGATTTGATCA GCTCATGGTGGGTGAATCTTTTTGGGCATAATAACGCCTACATCAGCCAGCAACTCAAAAATCAAATTGATGATTTAGAG CATGTCCTTTTGGCTTCTTTTAGCCATAAGCCCATTATCACGCTCTCTCAAAGGCTTTGCCAGCTCACTCATATGGATAA ATGCTTTTATGCGGATAACGGCTCATCTTGTGTTGAAATCGCTTTGAAAATGAGCTATCACGCCCATTTTTTAAAGAATC AAACGCGCCGCAAAAAGCTTTTTTTATCGCTCTCTAATTCCTATCATGGCGAGACTTTGGGAGCGTTAAGCGTGGGCGAT GTGAAACTTTATAAAGACACTTACACCCCTTTATTGCTCAAAAATCTCACCACACCTGTGCCTAAAAACGACCATGAAAT AGAAAATAGTTTGAACGCTTTAAAGCGTTTGTTAGACAAGCATAGTGAAGAAATTTGCGCTTTCATTGCAGAGCCTCTTT TGCAATGCGCAGGGAATATGCATATTTATAGCGCAAGATATTTAAAACAAGCCGTTTTATTGTGCAAGCAAAAAAACATC CACATTATTTTTGATGAAATCGCTACCGGGTTTGGGCGCACAGGGAGCATGTTTGCTTATGAACAATGCGAAATTAAGCC GGATTTTTTATGCTTGTCTAAGGGGATTAGTGGGGGGTATTTGCCTTTAAGCGCACTATTAACCCATAATGAAATCTATA ACCAATTTTACGCCCCCTATGAAGAAAATAAAGCGTTTTTGCATTCGCACAGCTACACAGGAAACGCTTTGGCATGCGCA TGCGCGAACGCTACGCTGGATATTTTTGAAAAAGAAAATGTTATTGAAAAGAACAAGGCTTTAAGCGGGTTTATTTTTAA TACGCTCCAAAACGCATTAAAACCCTTGATGGAGCAACAAGTGGTGTCTGATTTAAGGCATTTGGGCATGGTCTTTGCCT TTGAAGTCTTTATTCAAACCAAAGAGCGTTTGAGTTTGGCGGTTTTTAAAAAAACTCTAAAAAAAGGCCTGTTATTACGC CCTTTAAACAACACCATTTACCTCATGCCCCCTTACATTATCACGCATGAAGAAGTCAAAAAGGCGGTTGCGGGGCTAGT GGAAATTCTTGATGAGTTAAGAAAAGGCTGA
Upstream 100 bases:
>100_bases AAATATGAAATTCAGGTTTAAACAACCTTATAGTAAAATCAAATAACCTTATTTTAACCAAAGGTTATTAAAATTATCCT TATTATAGAGAGTTTTTAAC
Downstream 100 bases:
>100_bases AAGCGTTTTTAAAAATAAAATAGTAAAAAGCTTGAATTGGATCAAGCGATAGCTTTTTTCTGTCTGTTTGATTTCAAAAA TCAAGTTTTTAACTTGATAT
Product: adenosylmethionine--8-amino-7-oxononanoate transaminase
Products: NA
Alternate protein names: 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; Diaminopelargonic acid synthase [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDDLE HVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGD VKLYKDTYTPLLLKNLTTPVPKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNI HIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACA CANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQVVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLR PLNNTIYLMPPYIITHEEVKKAVAGLVEILDELRKG
Sequences:
>Translated_436_residues MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDDLE HVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGD VKLYKDTYTPLLLKNLTTPVPKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNI HIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACA CANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQVVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLR PLNNTIYLMPPYIITHEEVKKAVAGLVEILDELRKG >Mature_436_residues MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDDLE HVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGD VKLYKDTYTPLLLKNLTTPVPKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNI HIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACA CANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQVVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLR PLNNTIYLMPPYIITHEEVKKAVAGLVEILDELRKG
Specific function: Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=402, Percent_Identity=27.6119402985075, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI284507298, Length=311, Percent_Identity=28.6173633440514, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI37574042, Length=425, Percent_Identity=25.1764705882353, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI13994255, Length=375, Percent_Identity=24.8, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI226442705, Length=423, Percent_Identity=24.3498817966903, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI24119277, Length=446, Percent_Identity=24.6636771300448, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI226442709, Length=376, Percent_Identity=24.7340425531915, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1786991, Length=429, Percent_Identity=35.6643356643357, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1789759, Length=395, Percent_Identity=27.5949367088608, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI145693181, Length=401, Percent_Identity=27.1820448877805, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789016, Length=418, Percent_Identity=25.3588516746411, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1788044, Length=402, Percent_Identity=26.6169154228856, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1787560, Length=414, Percent_Identity=27.0531400966184, Blast_Score=119, Evalue=5e-28, Organism=Caenorhabditis elegans, GI25144271, Length=413, Percent_Identity=23.9709443099274, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI32564660, Length=435, Percent_Identity=27.816091954023, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25144274, Length=310, Percent_Identity=25.8064516129032, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71992977, Length=436, Percent_Identity=22.4770642201835, Blast_Score=88, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6324386, Length=469, Percent_Identity=32.409381663113, Blast_Score=256, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6323470, Length=434, Percent_Identity=25.8064516129032, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6324432, Length=405, Percent_Identity=24.6913580246914, Blast_Score=113, Evalue=5e-26, Organism=Drosophila melanogaster, GI21357415, Length=412, Percent_Identity=25.2427184466019, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI21356575, Length=427, Percent_Identity=25.0585480093677, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI28574759, Length=435, Percent_Identity=26.2068965517241, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI161085790, Length=440, Percent_Identity=25.9090909090909, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR005815 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.62 [H]
Molecular weight: Translated: 49769; Mature: 49769
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNL CCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHH FGHNNAYISQQLKNQIDDLEHVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEI HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHH ALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDVKLYKDTYTPLLLKNLTTPV HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCEEECCEEEECCCCCHHHHHHCCCCC PKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCC HIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPY EEEHHHHHCCCCCCCCEEEEHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCH EENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQ HCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLRPLNNTIYLMPPYIITHEEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCEEECHHHHH KAVAGLVEILDELRKG HHHHHHHHHHHHHHCC >Mature Secondary Structure MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNL CCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHH FGHNNAYISQQLKNQIDDLEHVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEI HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHH ALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDVKLYKDTYTPLLLKNLTTPV HHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCEEECCEEEECCCCCHHHHHHCCCCC PKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCC HIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPY EEEHHHHHCCCCCCCCEEEEHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCH EENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQ HCCCEEEEECCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLRPLNNTIYLMPPYIITHEEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCEEECHHHHH KAVAGLVEILDELRKG HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]