| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645574
GI number: 15645574
Start: 1016968
End: 1017732
Strand: Reverse
Name: Not Available
Synonym: HP0958
Alternate gene names: NA
Gene position: 1017732-1016968 (Counterclockwise)
Preceding gene: 15645575
Following gene: 15645573
Centisome position: 61.02
GC content: 36.47
Gene sequence:
>765_bases ATGAACACCCACCTCAAACAATTGATTGAAATTTCGCATTTGGATAAAGAAATTGACTCCTTAGAGCCATTGATCAGAGA AAAACGAAAAGACTTGGATAAGGCCTTGAATGATAAAGAAGCTAAAAATAAAGCGATTTTGAATTTAGAGGAAGAAAAAT TAGCCCTAAAATTACAAGTTTCTAAAAACGAGCAAACCCTACAAGACACGAACACTAAAATCGCTAGCATTCAAAAGAAA ATGAGCGAGATCAAATCCGAAAGGGAATTGCGATCTTTAAACATTGAAGAAGATATTGCTAAAGAGCGATCCAATCAAGC CAACAGAGAAATTGAAAACTTGCAAAATGAAATCAAGCACAAAAGCGAAAAACAAGAGGATTTGAAAAAAGAAATGCTAG AGCTTGAAAAATTAGTGCAGCAATTGGAAAGCTTAGTGGAAAATGAAGTCAAAAACATCAAAGAAACCCAACAAATCATC TTTAAAAAGAAAGAAGAACTCGTGGAAAAAACCGAGCCTAAAATCTATAGCTTTTATGAAAGGATCAGAAGATGGGCGAA AAACACGAGCATTGTAACGATCAAAAAACAGGCTTGTGGGGGTTGTTTTATTCGGTTGAATGATAAGATTTATACCGAAG TGCTAACGAGTGGGGATATGATCACTTGCCCGTATTGCGGGCGTATTTTATACGCTGAGGGCGCGTATGAAAACAGCGCT CAACCTCCAAAAGAAAGCCAAGAAGAAAGCCAAGAATTAGTTTGA
Upstream 100 bases:
>100_bases GGGTTTTGCGCTGATTGTGGCTGAAATTTTGCATTCTTTTAATTATTTGGTTACAATAGAGAATTTTAAAAACCCCTTGC AAATCATTTAAAGGAAAGCG
Downstream 100 bases:
>100_bases TTGTTTAAGTTTTTCTACCTTTTATTTTTGACTTTGGGGCATCTTCTTGGTGCACCTTTCATCTTCTTTTGGAGTTTTAA GGAAAAATACCGCCATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNTKIASIQKK MSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEDLKKEMLELEKLVQQLESLVENEVKNIKETQQII FKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA QPPKESQEESQELV
Sequences:
>Translated_254_residues MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNTKIASIQKK MSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEDLKKEMLELEKLVQQLESLVENEVKNIKETQQII FKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA QPPKESQEESQELV >Mature_254_residues MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNTKIASIQKK MSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEDLKKEMLELEKLVQQLESLVENEVKNIKETQQII FKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA QPPKESQEESQELV
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29692; Mature: 29692
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHCCCHHHHEEEEEEE SKNEQTLQDTNTKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH KSEKQEDLKKEMLELEKLVQQLESLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA HHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCC QPPKESQEESQELV CCCCCHHHHHHCCC >Mature Secondary Structure MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHCCCHHHHEEEEEEE SKNEQTLQDTNTKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH KSEKQEDLKKEMLELEKLVQQLESLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGAYENSA HHHHHHCCCCEEEEECCCCCCEEEEECHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCC QPPKESQEESQELV CCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA