| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645573
GI number: 15645573
Start: 1015786
End: 1016967
Strand: Reverse
Name: Not Available
Synonym: HP0957
Alternate gene names: 15645573
Gene position: 1016967-1015786 (Counterclockwise)
Preceding gene: 15645574
Following gene: 15645572
Centisome position: 60.97
GC content: 38.41
Gene sequence:
>1182_bases TTGTTTAAGTTTTTCTACCTTTTATTTTTGACTTTGGGGCATCTTCTTGGTGCACCTTTCATCTTCTTTTGGAGTTTTAA GGAAAAATACCGCCATTCTTTGAAAGCCCGTTTTTTTCTCAAAGACAATTTTTTAAAAAGCGAGCCGGTTTTTTGGTTCC ATGCATGCTCTTATGGGGAGGTCAAATCCTTAGAGCCAATCATTCACGCTTTAAAAGAGCCGATTTTAATCAGCGTTACC ACTAATACCGGCTTTGAATTAGCCGCTCAAACTTATCAGCATTCTAAGCATATAGAAGTGCGTTACCTGCCTTTTGAAAC CCTATTATTTGCATGGAAAAAAAACTTAAAACGCTTAAAAACTTTGGTGGTTACAGAAGCGGAATTGTGGTTTAATGTGT TTGATACGGCTCAAAAATTAGGGGCAAAAACCATGCTCATTAACGCTCGAATCAGCGTTCGTTCTTACCCCAAGTATCAG CGTTTTTCTTTCTTTTATGCGCTTTTATTCAAACGCATTGATTTGATTTTAGCGCAAAGCAAGGAGGATAAAAAGCGTTT GTTGAATCTAGGGGCAAAAAAAGTGGTGGATTTTTTGAATATCAAGCGTTTTTCAAAGCCTGTGATCACTTCGTTTTACC CTAAAAACCCAAGCGCTTTAAACATTGTTTTAGCCAGCACGCATGAGGGCGAAGAGGAATTAGGGTTAAAAGCGTTTTTG GAGCTAAAAAAGACTTTTAAAAACGCAAGACTGATTGTTGTGCCGCGCCACCCTGAGCGTTTTAAAAGCGTGCAAGATTT ATTGCAAAATACCTTAAAAACGACGCCTTTTAGTTGGGAATGTTTTTCTTCAAAGGGTTTTGTGGAATGCGATATTTTGT TAGTGGATAGCTTGGGGGAATTGAATAATTTCTACCAAATCGCAGACATTGTCATTTTAGGGGGTTCGTTTGTCAAAATG GGGGGGCATAACCCTTTAGAGCCGGCGTTTTTTAATGCGCGCTTGATCACAGGGGAGTATATTTTCAACCAGGTAGCGTT GTTTGAATTAGTCAAGCCTTATAAAATCGTTCCAAAAGAGGATCTGTTAGACGCTCTTTTAGATTACAAAAATTTAGGCA TGGCGCGTTTTTTAGAAAACGGGCATGATTTAAACGAATTGCTCGCTTTCATTAAACATTAA
Upstream 100 bases:
>100_bases TTGCCCGTATTGCGGGCGTATTTTATACGCTGAGGGCGCGTATGAAAACAGCGCTCAACCTCCAAAAGAAAGCCAAGAAG AAAGCCAAGAATTAGTTTGA
Downstream 100 bases:
>100_bases AAAGGATAAACATGGAAAAAGCTTATAAAATATTGAGCGTTCAAGAAAACATTTCGCATAAAAAAGCCAAAGCTTTGATT GACTCTGGGTTAGTGAGTAT
Product: 3-deoxy-D-manno-octulosonic-acid transferase
Products: NA
Alternate protein names: KdtA protein homolog; tRNA (guanine-N(7)-)-methyltransferase; tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGEVKSLEPIIHALKEPILISVT TNTGFELAAQTYQHSKHIEVRYLPFETLLFAWKKNLKRLKTLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQ RFSFFYALLFKRIDLILAQSKEDKKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL ELKKTFKNARLIVVPRHPERFKSVQDLLQNTLKTTPFSWECFSSKGFVECDILLVDSLGELNNFYQIADIVILGGSFVKM GGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVPKEDLLDALLDYKNLGMARFLENGHDLNELLAFIKH
Sequences:
>Translated_393_residues MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGEVKSLEPIIHALKEPILISVT TNTGFELAAQTYQHSKHIEVRYLPFETLLFAWKKNLKRLKTLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQ RFSFFYALLFKRIDLILAQSKEDKKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL ELKKTFKNARLIVVPRHPERFKSVQDLLQNTLKTTPFSWECFSSKGFVECDILLVDSLGELNNFYQIADIVILGGSFVKM GGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVPKEDLLDALLDYKNLGMARFLENGHDLNELLAFIKH >Mature_393_residues MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGEVKSLEPIIHALKEPILISVT TNTGFELAAQTYQHSKHIEVRYLPFETLLFAWKKNLKRLKTLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQ RFSFFYALLFKRIDLILAQSKEDKKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL ELKKTFKNARLIVVPRHPERFKSVQDLLQNTLKTTPFSWECFSSKGFVECDILLVDSLGELNNFYQIADIVILGGSFVKM GGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVPKEDLLDALLDYKNLGMARFLENGHDLNELLAFIKH
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG1519
COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Escherichia coli, GI1790064, Length=345, Percent_Identity=32.1739130434783, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007507 - InterPro: IPR003358 [H]
Pfam domain/function: PF04413 Glycos_transf_N; PF02390 Methyltransf_4 [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 45623; Mature: 45623
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGE CHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCC VKSLEPIIHALKEPILISVTTNTGFELAAQTYQHSKHIEVRYLPFETLLFAWKKNLKRLK CHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH TLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQRFSFFYALLFKRIDLILAQS HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC KEDKKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL CHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHH ELKKTFKNARLIVVPRHPERFKSVQDLLQNTLKTTPFSWECFSSKGFVECDILLVDSLGE HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCHHH LNNFYQIADIVILGGSFVKMGGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVPKE HHHHHHHHHHEEECCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHH DLLDALLDYKNLGMARFLENGHDLNELLAFIKH HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGE CHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCCCC VKSLEPIIHALKEPILISVTTNTGFELAAQTYQHSKHIEVRYLPFETLLFAWKKNLKRLK CHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH TLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQRFSFFYALLFKRIDLILAQS HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC KEDKKRLLNLGAKKVVDFLNIKRFSKPVITSFYPKNPSALNIVLASTHEGEEELGLKAFL CHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHH ELKKTFKNARLIVVPRHPERFKSVQDLLQNTLKTTPFSWECFSSKGFVECDILLVDSLGE HHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCHHH LNNFYQIADIVILGGSFVKMGGHNPLEPAFFNARLITGEYIFNQVALFELVKPYKIVPKE HHHHHHHHHHEEECCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHH DLLDALLDYKNLGMARFLENGHDLNELLAFIKH HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]