| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645510
GI number: 15645510
Start: 945691
End: 945963
Strand: Reverse
Name: Not Available
Synonym: HP0892
Alternate gene names: 15645510
Gene position: 945963-945691 (Counterclockwise)
Preceding gene: 15645511
Following gene: 15645508
Centisome position: 56.72
GC content: 35.53
Gene sequence:
>273_bases ATGCTGACGATTGAAACCAGTAAAAAATTTGATAAGGATCTTAAAATTCTTGTTAAAAACGGGTTTGATTTAAAGCTTTT GTATAAAGTGGTTGGAAATTTAGCCACAGAGCAACCCCTAGCTCCCAAATACAAAGACCACCCACTCAAAGGCGGTTTAA AAGATTTTAGGGAATGCCACTTAAAACCGGATTTATTGCTTGTCTATCAAATTAAAAAACAAGAAAACACCCTCTTTTTA GTAAGGTTAGGCAGTCATAGCGAGCTGTTTTGA
Upstream 100 bases:
>100_bases GAAATCTTAGCAAGGGCTAAGGACACTAAGAACCGCCTTTGTTTTAAAAGCATAGAGGATTTTAAGAAGCATTGTGAAAA CTTATAAATAAGATTTAAAA
Downstream 100 bases:
>100_bases ACCGCCCACACCCCTTATAACGCTTAAACCAACTACCCCCCTTTTTTAGGGATAAATTTAGGGTTGAAACACCGCTTACG CTTTTTGCTTTTTAAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antitoxin; Xin-Antitoxin System Toxin Component RelE Family; Addiction Module xin; Addiction Module xin Rele/Stbe Family; Xin Of YafQ-DinJ Toxin-Antitoxin System; Addiction Module xin RelE/StbE; DNA Damage Inducible Protein; RelE Family xin-Antitoxin System Toxin Protein; RelE xin/Antitoxin Addiction Module Toxin Protien; StbE/RelE-Family Protein; RelE xin
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQENTLFL VRLGSHSELF
Sequences:
>Translated_90_residues MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQENTLFL VRLGSHSELF >Mature_90_residues MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQENTLFL VRLGSHSELF
Specific function: Unknown
COG id: COG3041
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786419, Length=88, Percent_Identity=37.5, Blast_Score=59, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10413; Mature: 10413
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECH CEEECCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC LKPDLLLVYQIKKQENTLFLVRLGSHSELF CCCCEEEEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECH CEEECCCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHC LKPDLLLVYQIKKQENTLFLVRLGSHSELF CCCCEEEEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA