| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645479
GI number: 15645479
Start: 913292
End: 913813
Strand: Reverse
Name: Not Available
Synonym: HP0860
Alternate gene names: 15645479
Gene position: 913813-913292 (Counterclockwise)
Preceding gene: 15645480
Following gene: 15645478
Centisome position: 54.79
GC content: 36.59
Gene sequence:
>522_bases ATGAACACTAACAAAGCCCTTTTTTTGGACAGAGACGGCATTATCAATATTGATAAAGGCTATGTGAGTCAAAAAGAAGA TTTTGAGTTTCAAAAAGGGATTTTTGAATTGCTAAAGCATGCGAAATCTTTAGGCTACAAACTGCTTTTAATCACCAACC AATCTGGGATCAACCGAGGCTATTACACCCTTAAAGATTTTGAACAACTCACCCAATACCTCCAAGAAAGCTTGTTCAAA GAATTAGGTTTTAATCTGGATGGCATCTATTTTTGCAGGCACGCCCCAGAAGAAAATTGCGCTTGCAGGAAGCCAAAGCC TTCTTTGATTTTGCAAGCTGCTAAAGAGCATCAAATTTGCTTGGAGCAATCTTTTATGATAGGCGATAAAGAGAGCGACA TGTTAGCCGGCTTGAACGCTAAAGTTAAAAATAACCTTTTGCTCATTCAAAACCCTTTAAAAACTCCTCATTCTTGGATA CAATGTAAAGATTTTAAAGAGATGATAGATCTAATCAAATAA
Upstream 100 bases:
>100_bases ATCCTTTATATGGGGATCATGCTCATTAACCACAAAATGCCTCATGCCATGCATCATCAAAACAACACCACTCAGCATGA TCATAAAGGAGTGCATTCGC
Downstream 100 bases:
>100_bases GGACAAGAATGCGTTATATTGATGATGAATTAGAAAATCAAACGATTTTAATCACCGGTGGGGCTGGCTTTGTAGGCAGT AATCTAGCCTTTTATTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLKHAKSLGYKLLLITNQSGINRGYYTLKDFEQLTQYLQESLFK ELGFNLDGIYFCRHAPEENCACRKPKPSLILQAAKEHQICLEQSFMIGDKESDMLAGLNAKVKNNLLLIQNPLKTPHSWI QCKDFKEMIDLIK
Sequences:
>Translated_173_residues MNTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLKHAKSLGYKLLLITNQSGINRGYYTLKDFEQLTQYLQESLFK ELGFNLDGIYFCRHAPEENCACRKPKPSLILQAAKEHQICLEQSFMIGDKESDMLAGLNAKVKNNLLLIQNPLKTPHSWI QCKDFKEMIDLIK >Mature_173_residues MNTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLKHAKSLGYKLLLITNQSGINRGYYTLKDFEQLTQYLQESLFK ELGFNLDGIYFCRHAPEENCACRKPKPSLILQAAKEHQICLEQSFMIGDKESDMLAGLNAKVKNNLLLIQNPLKTPHSWI QCKDFKEMIDLIK
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=160, Percent_Identity=40.625, Blast_Score=134, Evalue=2e-33, Organism=Escherichia coli, GI87082027, Length=136, Percent_Identity=34.5588235294118, Blast_Score=77, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.1.-
Molecular weight: Translated: 19994; Mature: 19994
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLKHAKSLGYKLLLITNQSGINRG CCCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC YYTLKDFEQLTQYLQESLFKELGFNLDGIYFCRHAPEENCACRKPKPSLILQAAKEHQIC CEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LEQSFMIGDKESDMLAGLNAKVKNNLLLIQNPLKTPHSWIQCKDFKEMIDLIK HHHHHHCCCCCCHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLKHAKSLGYKLLLITNQSGINRG CCCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC YYTLKDFEQLTQYLQESLFKELGFNLDGIYFCRHAPEENCACRKPKPSLILQAAKEHQIC CEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LEQSFMIGDKESDMLAGLNAKVKNNLLLIQNPLKTPHSWIQCKDFKEMIDLIK HHHHHHCCCCCCHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682; 12101286 [H]