| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645464
GI number: 15645464
Start: 895977
End: 896798
Strand: Reverse
Name: Not Available
Synonym: HP0845
Alternate gene names: 15645464
Gene position: 896798-895977 (Counterclockwise)
Preceding gene: 15645465
Following gene: 15645463
Centisome position: 53.77
GC content: 42.94
Gene sequence:
>822_bases ATGGATTTTTGTAAAATAAAAGAAATTTTAAGGAGGCTTGTGGTGTTGAAAGAATTACGCCAAAAACGCCCTTTAGTGCA TAATATCACCAATTATGTGGCGGCGCAATTTGTGGCTAATGGTTTGTTAGCTTTAGGGGCATCGCCTTTAATGAGCGATG CGATTGATGAAATGCGAGATTTAGCGAAAATTTCTGACGCGCTCGCTATCAATATTGGCACCCTTAATGATCGCGCTATT TTATGCGCTAAAGAGGCTATCAAGCATTACAAGGCTTTGAACAAACCCATTGTGTTAGATCCTGTGGGGTGTTCAGCGAG CGCTTTGCGTCATGACACCAGTTTAGAGCTTTTGAAAAGTGGTGGGATTAGCGCGCTTAGGGGTAATGCTGCAGAATTAG GCTCTTTAGTGGGGATTTCTTGCGAAAGTAAGGGGCTAGACTCTAATGATGCCGCCACGCCTGTAGAAATAATCAAATTA GCGGCTCAAAAATATTCTGTGATAGCGGTAATGACGGGTAAAACAGATTACGTGAGCGATGGGAAAAAGGTTTTGAGTAT TACTGGGGGGAGCGAGTATTTAGCGCTCATTACTGGGGCTGGGTGTTTGCATGCCGCAGCATGCGCGAGCTTTTTAAGTT TGAAAAAAGACCCCTTAGATTCTATGGCGCAACTTTGCGCGCTCTATAAACAAGCCGCTTTTAACGCGCAAAAAAAGGTG TTGGAAAATAACGGCTCTAATGGTTCGTTCTTGTTTTATTTTTTAGATGCTCTAAGCTTGCCCATAGAGTTAGAAAACAG CCTTATTAAGGAAGAGTGGTGA
Upstream 100 bases:
>100_bases CTAGCGCTATATTTAAGAAAAATGAGGTTAAAAAAGATGAGGTTAATGAAAAATAGTTCATGAACGCTTTTGCATTAAGG CTCAAAAAAAGCGCCGTTTA
Downstream 100 bases:
>100_bases AAATTTACCCGCAAGTTTTAAGCATTGCTGGCAGCGATAGCGGTGGGGGCTCTGGGATACAGGCCGATTTGAAAGCGTTC CAAACTTTGGGCGTGTTTGG
Product: hydroxyethylthiazole kinase
Products: NA
Alternate protein names: 4-methyl-5-beta-hydroxyethylthiazole kinase; TH kinase; Thz kinase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MDFCKIKEILRRLVVLKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRDLAKISDALAINIGTLNDRAI LCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKSGGISALRGNAAELGSLVGISCESKGLDSNDAATPVEIIKL AAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEYLALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKV LENNGSNGSFLFYFLDALSLPIELENSLIKEEW
Sequences:
>Translated_273_residues MDFCKIKEILRRLVVLKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRDLAKISDALAINIGTLNDRAI LCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKSGGISALRGNAAELGSLVGISCESKGLDSNDAATPVEIIKL AAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEYLALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKV LENNGSNGSFLFYFLDALSLPIELENSLIKEEW >Mature_273_residues MDFCKIKEILRRLVVLKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRDLAKISDALAINIGTLNDRAI LCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKSGGISALRGNAAELGSLVGISCESKGLDSNDAATPVEIIKL AAQKYSVIAVMTGKTDYVSDGKKVLSITGGSEYLALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKV LENNGSNGSFLFYFLDALSLPIELENSLIKEEW
Specific function: Thiamine biosynthesis. [C]
COG id: COG2145
COG function: function code H; Hydroxyethylthiazole kinase, sugar kinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Thz kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788421, Length=244, Percent_Identity=38.5245901639344, Blast_Score=147, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6325042, Length=298, Percent_Identity=32.8859060402685, Blast_Score=109, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000417 [H]
Pfam domain/function: PF02110 HK [H]
EC number: =2.7.1.50 [H]
Molecular weight: Translated: 29229; Mature: 29229
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFCKIKEILRRLVVLKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAKISDALAINIGTLNDRAILCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKS HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHHHHC GGISALRGNAAELGSLVGISCESKGLDSNDAATPVEIIKLAAQKYSVIAVMTGKTDYVSD CCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCC GKKVLSITGGSEYLALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKV CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LENNGSNGSFLFYFLDALSLPIELENSLIKEEW HHCCCCCCCCHHEEHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MDFCKIKEILRRLVVLKELRQKRPLVHNITNYVAAQFVANGLLALGASPLMSDAIDEMRD CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LAKISDALAINIGTLNDRAILCAKEAIKHYKALNKPIVLDPVGCSASALRHDTSLELLKS HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCHHHHHHHC GGISALRGNAAELGSLVGISCESKGLDSNDAATPVEIIKLAAQKYSVIAVMTGKTDYVSD CCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCC GKKVLSITGGSEYLALITGAGCLHAAACASFLSLKKDPLDSMAQLCALYKQAAFNAQKKV CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LENNGSNGSFLFYFLDALSLPIELENSLIKEEW HHCCCCCCCCHHEEHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA