Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

Click here to switch to the map view.

The map label for this gene is acpS

Identifier: 15645427

GI number: 15645427

Start: 863551

End: 863910

Strand: Reverse

Name: acpS

Synonym: HP0808

Alternate gene names: 15645427

Gene position: 863910-863551 (Counterclockwise)

Preceding gene: 15645428

Following gene: 15645426

Centisome position: 51.8

GC content: 40.28

Gene sequence:

>360_bases
ATGATTGGCATAGATATTGTCTCTATTGCTAGGATAGAAAAGTGCGTGAAACGCTTTAAAATGAAGTTTTTAGAGCGTTT
TTTATCGCCAAGCGAGATTGTTTTATGCAAGGATAAATCCAGCAGTATCGCCGGGTTTTTCGCGCTTAAAGAGGCTTGTT
CTAAAGCCCTTCAAGTGGGCATTGGTAAGGAATTGAGCTTTTTGGATATAAAAATCTCTAAAAGCCCTAAAAACGCCCCC
TTAATCACCCTTTCCAAAGAAAAAATGGATTATTTCAATATCCAAAGCTTGAGCGCGAGCATCAGCCATGACGCTGGTTT
TGCGATAGCGGTCGTGGTGGTTTCTTCGTCAAATGAATAA

Upstream 100 bases:

>100_bases
CAAGCTTAAAGATGAGATTAAGAGCCATTTGAATTCGTTTTTGATTGATGGCTTTATTAAAAATGTCTTTTTCACTGATT
TCATTATCCAATAATTTTAA

Downstream 100 bases:

>100_bases
ATAACGCATTCTAAAACTAACATTCTGTTTTAAAAAGCGCTTAACGGCTGTTTAAAAAACGCAAAAAACTTTTTTCAAAT
GGTTTTGATAACAAATTGCA

Product: 4'-phosphopantetheinyl transferase

Products: NA

Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MIGIDIVSIARIEKCVKRFKMKFLERFLSPSEIVLCKDKSSSIAGFFALKEACSKALQVGIGKELSFLDIKISKSPKNAP
LITLSKEKMDYFNIQSLSASISHDAGFAIAVVVVSSSNE

Sequences:

>Translated_119_residues
MIGIDIVSIARIEKCVKRFKMKFLERFLSPSEIVLCKDKSSSIAGFFALKEACSKALQVGIGKELSFLDIKISKSPKNAP
LITLSKEKMDYFNIQSLSASISHDAGFAIAVVVVSSSNE
>Mature_119_residues
MIGIDIVSIARIEKCVKRFKMKFLERFLSPSEIVLCKDKSSSIAGFFALKEACSKALQVGIGKELSFLDIKISKSPKNAP
LITLSKEKMDYFNIQSLSASISHDAGFAIAVVVVSSSNE

Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein [H]

COG id: COG0736

COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P-Pant transferase superfamily. AcpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008278
- InterPro:   IPR002582
- InterPro:   IPR004568
- ProDom:   PD004282 [H]

Pfam domain/function: PF01648 ACPS [H]

EC number: =2.7.8.7 [H]

Molecular weight: Translated: 13004; Mature: 13004

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIDIVSIARIEKCVKRFKMKFLERFLSPSEIVLCKDKSSSIAGFFALKEACSKALQVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
IGKELSFLDIKISKSPKNAPLITLSKEKMDYFNIQSLSASISHDAGFAIAVVVVSSSNE
CCCCEEEEEEEECCCCCCCCEEEEECCCCCEECHHHHHCCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MIGIDIVSIARIEKCVKRFKMKFLERFLSPSEIVLCKDKSSSIAGFFALKEACSKALQVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
IGKELSFLDIKISKSPKNAPLITLSKEKMDYFNIQSLSASISHDAGFAIAVVVVSSSNE
CCCCEEEEEEEECCCCCCCCEEEEECCCCCEECHHHHHCCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA