| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645410
GI number: 15645410
Start: 846877
End: 848937
Strand: Reverse
Name: Not Available
Synonym: HP0791
Alternate gene names: 15645410
Gene position: 848937-846877 (Counterclockwise)
Preceding gene: 15645411
Following gene: 15645409
Centisome position: 50.9
GC content: 42.6
Gene sequence:
>2061_bases ATGCAAGAATACCACATTCATAATTTGGATTGCCCTGATTGTGCGTCTAAATTAGAAAGGGATTTAAACGAATTAGACTA TGTGAAAAAAGCTCAAATCAATTTCAGCACCAGTAAGTTGTTTTTGGACACGAGCGATTTTGAAAAAGTTAAGGCTTTCA TCAAGCAGAATGAACCGCATTTGAGCCTGTCTTTTAAAGAGGCTACAGAAAAGCCCTTGAGTTTTACGCCACTCATCATT ACGATCATGGTTTTTTTGGGCGCGATTTTAATCTTGCACCTAAACCCTAGCCCTTTGATTGAAAAGGCTATGTTTTTCGT GTTGGCTTTAGTGTATCTAGTGAGCGGTAAAGATGTGATTTTAGGGGCGTTTCGTGGGCTTAGGAAAGGGCAATTTTTTG ATGAAAACGCTTTGATGCTCATTGCGACTATTGCGGCTTTTTTTGTGGGGGCTTATGAAGAGAGCGTGTCTATTATGGTG TTTTATTCAGCGGGCGAATTTTTGCAAAAACTCGCTGTCTCTCGCTCTAAAAAATCCCTTAAGGCTTTAGTGGATGTCGC TCCTAATTTGGCTTATTTGAAAAAGGGCGATGAATTAGTGAGCGTTGCGCCTGAAGATTTAAGAGTCAATGATATTGTGG TGGTGAAAGTTGGCGAAAAAGTGCCTGTGGATGGCGTGGTAGTTAAGGGCGAAAGCTTGCTAGATGAAAGGGCGTTGAGT GGGGAGTCTATGCCTGTTAATGTCAGCGAAAATTCTAAAGTTTTAGGGGGGAGCTTGAATTTAAAAGCGGTCCTTGAAAT TCAAGTGGAAAAAATGTATAAAGATTCTTCTATCGCTAAAGTGGTGGATTTGGTCCAACAAGCCACGAATGAAAAGAGCG AAACCGAGAAATTTATCACTAAATTTTCACGCTACTACACCCCAAGCGTTTTATTCATTGCTTTAATGATCGCTGTATTA CCGCCCTTGTTTTCTATGGGGAGCTTTGATGAGTGGATTTATAGGGGGCTTGTGGCTTTAATGGTGAGCTGCCCTTGCGC GTTAGTGATTTCTGTGCCTTTAGGGTATTTTGGGGGCGTGGGAGCAGCAAGCAGAAAGGGCATTTTAATGAAAGGCGTGC ATGTTTTAGAGGTGCTTACCCAAGCTAAAAGCATCGCTTTTGATAAAACCGGCACTTTGACTAAAGGCGTTTTTAAAGTA ACGGATATTGTGCCGCAAAATGGGCATTCTAAAGAAGAAGTTTTGCATTACGCTTCTTGTTCGCAGCTCTTATCCACGCA CCCTATCGCTTTATCCATTCAAAAAGCATGCGAAGAAATGTTAAAGGACGATAAGCACCAACATGACATTAAAAATTACG AAGAAGTGAGCGGGATGGGGGTTAAAGCGCAATGCCATACGGATTTAATCATCGCAGGGAATGAAAAAATGCTCGATCAA TTCCATATCGCGCACAGCCCTTCCAAAGAAAACGGCACGATCGTGCATGTGGCTTTCAATCAAACTTATGTGGGCTATAT CGTCATTAGCGATGAGATTAAAGATGACGCCATAGAGTGCTTAAGGGATTTAAAAGTGCAAGGGATAGAAAATTTTTGCA TTTTGAGCGGGGACAGAAAGAGCGCGACTGAGAGCATCGCTCAAACCCTAGGCTGTGAATACCATGCGAGCTTGTTGCCT GAAGAAAAAACGAGCGTGTTTAAAACCTTTAAAGAACGCTATAAAGCTCCGGCGATTTTTGTAGGCGATGGCATCAATGA CGCTCCGACTCTAGCGAGTGCTGATGTGGGGATTGGCATGGGGAAAGGATCAGAATTGAGCAAGCAAAGCGCAGACATTG TGATCACCAATGACTCTTTAAATTCGTTAGTGAAAGTTTTAGCGATCGCTAAAAAAACTAAAAGCATTATTTGGCAAAAT ATCTTGTTCGCTTTAGGGATTAAAGCCGTTTTTATCGTGCTAGGGCTTATGGGGGTAGCGAGCTTGTGGGAAGCGGTCTT TGGCGATGTGGGGGTTACGCTTTTAGCCTTAGCCAATTCCATGCGCGCGATGAGAGCTTAA
Upstream 100 bases:
>100_bases TGCGGATTTAAACGCTTGCGAGGATATAGAAAAATCTCACATGCTTAAAGCGCTGAGTTTTAGAAAGATTTCTTAAAAGG ATTTTTATAAGGGAGAAAAA
Downstream 100 bases:
>100_bases AGCCTTGATCGTATCATTAGCCATTTAGAAAGGGGGGCAAAATGCATAAAATAGAGCGCTTACTCCAAACTCTAGCGCCT AAGGGGGTGGAGTTTAAAAC
Product: cadmium-transporting ATPase, P-type (cadA)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MQEYHIHNLDCPDCASKLERDLNELDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEATEKPLSFTPLII TIMVFLGAILILHLNPSPLIEKAMFFVLALVYLVSGKDVILGAFRGLRKGQFFDENALMLIATIAAFFVGAYEESVSIMV FYSAGEFLQKLAVSRSKKSLKALVDVAPNLAYLKKGDELVSVAPEDLRVNDIVVVKVGEKVPVDGVVVKGESLLDERALS GESMPVNVSENSKVLGGSLNLKAVLEIQVEKMYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV TDIVPQNGHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDDKHQHDIKNYEEVSGMGVKAQCHTDLIIAGNEKMLDQ FHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGIENFCILSGDRKSATESIAQTLGCEYHASLLP EEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKAVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA
Sequences:
>Translated_686_residues MQEYHIHNLDCPDCASKLERDLNELDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEATEKPLSFTPLII TIMVFLGAILILHLNPSPLIEKAMFFVLALVYLVSGKDVILGAFRGLRKGQFFDENALMLIATIAAFFVGAYEESVSIMV FYSAGEFLQKLAVSRSKKSLKALVDVAPNLAYLKKGDELVSVAPEDLRVNDIVVVKVGEKVPVDGVVVKGESLLDERALS GESMPVNVSENSKVLGGSLNLKAVLEIQVEKMYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV TDIVPQNGHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDDKHQHDIKNYEEVSGMGVKAQCHTDLIIAGNEKMLDQ FHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGIENFCILSGDRKSATESIAQTLGCEYHASLLP EEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKAVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA >Mature_686_residues MQEYHIHNLDCPDCASKLERDLNELDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEATEKPLSFTPLII TIMVFLGAILILHLNPSPLIEKAMFFVLALVYLVSGKDVILGAFRGLRKGQFFDENALMLIATIAAFFVGAYEESVSIMV FYSAGEFLQKLAVSRSKKSLKALVDVAPNLAYLKKGDELVSVAPEDLRVNDIVVVKVGEKVPVDGVVVKGESLLDERALS GESMPVNVSENSKVLGGSLNLKAVLEIQVEKMYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV TDIVPQNGHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDDKHQHDIKNYEEVSGMGVKAQCHTDLIIAGNEKMLDQ FHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGIENFCILSGDRKSATESIAQTLGCEYHASLLP EEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKAVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA
Specific function: Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=798, Percent_Identity=24.6867167919799, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI115529486, Length=681, Percent_Identity=26.1380323054332, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI55743073, Length=524, Percent_Identity=26.9083969465649, Blast_Score=172, Evalue=1e-42, Organism=Escherichia coli, GI1789879, Length=690, Percent_Identity=33.9130434782609, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1786691, Length=695, Percent_Identity=25.0359712230216, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1786914, Length=526, Percent_Identity=24.5247148288973, Blast_Score=121, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17556548, Length=694, Percent_Identity=26.0806916426513, Blast_Score=176, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320475, Length=540, Percent_Identity=27.5925925925926, Blast_Score=210, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6319772, Length=599, Percent_Identity=25.8764607679466, Blast_Score=175, Evalue=2e-44, Organism=Drosophila melanogaster, GI221329854, Length=471, Percent_Identity=25.6900212314225, Blast_Score=122, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3; =3.6.3.5 [H]
Molecular weight: Translated: 75013; Mature: 75013
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEYHIHNLDCPDCASKLERDLNELDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHCCCCC LSLSFKEATEKPLSFTPLIITIMVFLGAILILHLNPSPLIEKAMFFVLALVYLVSGKDVI EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHH LGAFRGLRKGQFFDENALMLIATIAAFFVGAYEESVSIMVFYSAGEFLQKLAVSRSKKSL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH KALVDVAPNLAYLKKGDELVSVAPEDLRVNDIVVVKVGEKVPVDGVVVKGESLLDERALS HHHHHHCCCHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHCC GESMPVNVSENSKVLGGSLNLKAVLEIQVEKMYKDSSIAKVVDLVQQATNEKSETEKFIT CCCCEEEECCCCEEECCCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH KFSRYYTPSVLFIALMIAVLPPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGV HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC GAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKVTDIVPQNGHSKEEVLHYASC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH SQLLSTHPIALSIQKACEEMLKDDKHQHDIKNYEEVSGMGVKAQCHTDLIIAGNEKMLDQ HHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHH FHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGIENFCILSGDRK HHHCCCCCCCCCEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCH SATESIAQTLGCEYHASLLPEEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGM HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC GKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQNILFALGIKAVFIVLGLMGVA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWEAVFGDVGVTLLALANSMRAMRA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQEYHIHNLDCPDCASKLERDLNELDYVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHCCCCC LSLSFKEATEKPLSFTPLIITIMVFLGAILILHLNPSPLIEKAMFFVLALVYLVSGKDVI EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCHHH LGAFRGLRKGQFFDENALMLIATIAAFFVGAYEESVSIMVFYSAGEFLQKLAVSRSKKSL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHH KALVDVAPNLAYLKKGDELVSVAPEDLRVNDIVVVKVGEKVPVDGVVVKGESLLDERALS HHHHHHCCCHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHCC GESMPVNVSENSKVLGGSLNLKAVLEIQVEKMYKDSSIAKVVDLVQQATNEKSETEKFIT CCCCEEEECCCCEEECCCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH KFSRYYTPSVLFIALMIAVLPPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGV HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC GAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKVTDIVPQNGHSKEEVLHYASC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH SQLLSTHPIALSIQKACEEMLKDDKHQHDIKNYEEVSGMGVKAQCHTDLIIAGNEKMLDQ HHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHH FHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGIENFCILSGDRK HHHCCCCCCCCCEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCH SATESIAQTLGCEYHASLLPEEKTSVFKTFKERYKAPAIFVGDGINDAPTLASADVGIGM HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC GKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQNILFALGIKAVFIVLGLMGVA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWEAVFGDVGVTLLALANSMRAMRA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]