| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645310
GI number: 15645310
Start: 737394
End: 739322
Strand: Reverse
Name: Not Available
Synonym: HP0687
Alternate gene names: 15645310
Gene position: 739322-737394 (Counterclockwise)
Preceding gene: 15645328
Following gene: 15645309
Centisome position: 44.33
GC content: 39.55
Gene sequence:
>1929_bases ATGAAAGAAATCACTATCGCCCTTGTGGGCCAGCCTAATGTGGGGAAATCGTCCTTAATCAACGCTTTGAGCAACGCCCA TTTGAAAGTGGGGAATTTTGCCGGGGTTACCGTGGATAAAATGGAAGTGGGTTTGATCCACAAAGAGCATCAAATCACTA TCATTGATTTACCTGGCACTTACGCGCTCAATGACTTCACCACTGAAGAAAAGGTTACTAAAGATTTTTTAGAAAAAGGG CAATACGATCTCATTCTTAATGTGGTGGATTCCACCAATTTAGAGCGTAATTTAGCCTTAAGCGCGCAGCTATTAGACAC GAATAAAAAAATGCTACTCGCACTCAACATGTGGGATGAGGCACAAAAAGAGGGCATTAAAATCAATACAGAAAAGCTTT CTAAAGAATTAGGGGTTGTGTGCGTGCCAACAAGTGCAAGATCCAAAGAAGATCGCTTGAATACCGAGCTTTTATTAGAC GAAATTGTCAGGCTTTATTCTCAAAATACTACAAATAATGAAAACATAAAAGTCCCGTCTCAAAGCTTTAAGGAGTCTTT AAAATACAGCCAGAGCGCTCAAAGAATCGCTCAATTAGTGATCAGTGAAAACCAACAAAACGCGAGTTTTGAACACACTT ATAAGATTGATAAGATTTTAATGCACAAGCGTTATGGGATTTTCATTTTTTTAGGGTTTATGTTTATCATTTTTTCCTTG AGCTTTTTAATAGGGGGGGGAGTGCAAAAAGCGCTTGAAACAGGGTTTAAATTTTTAAGCGATGGCATCAAAGAAAATGT GGCTAATGAAGATTTAGCGTCTTTGGTGGGCGATGGCATTATTGGGGGAGTGGGAGCGACGGTTTCATTCTTGCCTTTAA TTGTGGTGTTGTATTTTGGGATTTCTTTACTAGAGACGACAGGCTATATGAGTAGGGTAGCGTTTTTGTTAGATGGGATC TTGCATAAATTTGGCTTACATGGGAAGAGTTTTATCCCTTTAATCACCGGTTTTGGCTGCTCAGTGCCCGCTTACATGGC GACAAGAACCTTACAAAACTATAACGAACGACTGATCACGCTTTTTGTGATCGGGTTTATGAGCTGCTCGGCAAGGCTGC CTATTTATGTGCTGTTTGTAGGCTCGTTTTTCCCTTCTTCAAGTGCTGGGTTTGTGCTGTTTTGCATTTATATTTTGGGG GCGGTTGTGGCGTTAGTGATGGCCAAATTACTCAAATTAAGCGTGTTTAAAGGACAAACCGAATCTTTTATCATGGAAAT GCCCAAATACCGCTTTCCCAGTTGGAGAATGGTCTATTTCAGTATCTACACCAAATCGCTTTCTTACCTTAAAAAGGCTG GGACTTACATTTTAGTGGGAGCGATTTTAATCTGGTTTATGTCTCAATACCCTAAAAGCGATGCGGCCATGAAAGCTTAT AAACAAGAAAGCTTGTTAGTGAATAAGGATACCACTCTTTCAAGCGAAGCTAAAGAAGAAAAATTAAAAGAATTAAAAAC AGAATTGGATAAAAAGAATTTAAAAAATAGCATTGTAGGAAGAGGCGGGGCGTATTTAGAAAAAGTCTTTAGCCCTATGG ATTTTGATTGGCGTTTGAGTGTGTCGCTTGTAACCGGATTTATGGCTAAAGAGGTGGTGGTTTCTACTTTGGGCGTGTTG TTTTCTTTAGGGGATCAAAATGAAAAATCTGACGCTTTTAGAGGGATTTTAAGAAAAGAAGTCAGCGTGCCTAGCGGAAT CGCTTTTATCGTGTTTGTGATGTTTTATATCCCTTGTTTTGCAGCGACCATTACTTTTGGTAGGGAAGCGGGAGGGATAA AGTTTGTAGCGTATTTATTCATCTTCACAACCGTTGTAGCGTATGCGTTTTCCTTGATAGCTTTTTATGCGACTCAAATT TTGGTTTAA
Upstream 100 bases:
>100_bases TATATAACAATTAGTCTTATAGCGCTATAGTGCTGACTTTTAATCTAAAAACGATATAACTAAAAATTAGAAAAACTTTA ATGCGGAGCATTCAAACCCA
Downstream 100 bases:
>100_bases AAAGGCTAGCCATAAAGGGTTTTTAAGCCCTTTATTTGTTTAAAATTCACCCCATTAGAAATATTAAAAAATTTTTATTT TTCTTCCAATCTTTTCTATA
Product: iron(II) transport protein (feoB)
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLEKG QYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSKELGVVCVPTSARSKEDRLNTELLLD EIVRLYSQNTTNNENIKVPSQSFKESLKYSQSAQRIAQLVISENQQNASFEHTYKIDKILMHKRYGIFIFLGFMFIIFSL SFLIGGGVQKALETGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLDGI LHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILG AVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMKAY KQESLLVNKDTTLSSEAKEEKLKELKTELDKKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLGVL FSLGDQNEKSDAFRGILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQI LV
Sequences:
>Translated_642_residues MKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLEKG QYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSKELGVVCVPTSARSKEDRLNTELLLD EIVRLYSQNTTNNENIKVPSQSFKESLKYSQSAQRIAQLVISENQQNASFEHTYKIDKILMHKRYGIFIFLGFMFIIFSL SFLIGGGVQKALETGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLDGI LHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILG AVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMKAY KQESLLVNKDTTLSSEAKEEKLKELKTELDKKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLGVL FSLGDQNEKSDAFRGILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQI LV >Mature_642_residues MKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLEKG QYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSKELGVVCVPTSARSKEDRLNTELLLD EIVRLYSQNTTNNENIKVPSQSFKESLKYSQSAQRIAQLVISENQQNASFEHTYKIDKILMHKRYGIFIFLGFMFIIFSL SFLIGGGVQKALETGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLDGI LHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILG AVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMKAY KQESLLVNKDTTLSSEAKEEKLKELKTELDKKNLKNSIVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLGVL FSLGDQNEKSDAFRGILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQI LV
Specific function: ATP-driven Fe(2+) uptake system [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=749, Percent_Identity=28.3044058744993, Blast_Score=270, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 71423; Mature: 71423
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGT CCEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECCCC YALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDE EEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECHHH AQKEGIKINTEKLSKELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNENIKVPS HHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCH QSFKESLKYSQSAQRIAQLVISENQQNASFEHTYKIDKILMHKRYGIFIFLGFMFIIFSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLIGGGVQKALETGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFG HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHH ISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLIT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKGQT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMKAY HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH KQESLLVNKDTTLSSEAKEEKLKELKTELDKKNLKNSIVGRGGAYLEKVFSPMDFDWRLS HHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEH VSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFRGILRKEVSVPSGIAFIVFVMFYIPCF HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGT CCEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECCCC YALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDE EEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECHHH AQKEGIKINTEKLSKELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNENIKVPS HHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCH QSFKESLKYSQSAQRIAQLVISENQQNASFEHTYKIDKILMHKRYGIFIFLGFMFIIFSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLIGGGVQKALETGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFG HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHH ISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLIT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKGQT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMKAY HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH KQESLLVNKDTTLSSEAKEEKLKELKTELDKKNLKNSIVGRGGAYLEKVFSPMDFDWRLS HHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEH VSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFRGILRKEVSVPSGIAFIVFVMFYIPCF HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]