Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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The map label for this gene is Not Available

Identifier: 15645309

GI number: 15645309

Start: 734843

End: 737146

Strand: Reverse

Name: Not Available

Synonym: HP0686

Alternate gene names: 15645309

Gene position: 737146-734843 (Counterclockwise)

Preceding gene: 15645310

Following gene: 15645307

Centisome position: 44.2

GC content: 39.76

Gene sequence:

>2304_bases
ATGAAAAGAATTTTAGTCTCTTTGGCTGTTTTGAGTCATAGCGCGCATGCTGTCAAAACTCATAATTTGGAAAGGGTGGA
AGCTTCAGGGGTGGCTAACGATAAGGAAGCGCCTTTAAGCTGGAGGAGCAAGGAAGTGAGAAACTATATGGGATCTCGCA
CGGTGATTTCTAACAAGCAACTCACTAAAAGCGCCAATCAGAGCATTGAAGAAGCTTTGCAAAATGTGCCAGGCGTGCAT
ATTAGAAACGCTACGGGTATTGGAGCTGTGCCTAGCTTTTCTGTTAGGGGCTTTGGTGGGGGAAGTTCAGGGCATTCCAA
TACGGCTATGGTTTTAGTCAATGGGATCCCTATTTATGTTGCGCCCTATGTTGATATTAGCATTCCTATTTTCCCTGTAA
CCTTTCAATCTGTAGATAGAATCAGCGTAACCAAGGGTGGGGAGAGCGTGCGTTATGGCCCTAATGTTTTTGGCGGTGTG
ATTAATGTGATCACTAAGGGCATTCCTACCAAGTGGGAGAGTCAGGTGAGCGAGAGGGCCACTTTTTGGGGCAAATCTGA
AAATGGGGGCTTTTTCAATCAAAATTCTAAAAACCTTGACAAAAGCTTAGCCAATAACATGCTTTTTGACACTTACTTAA
GAACAGGGGGCATGATGAATAAGCATTTTGGAATCCAAGCTCAAGCCAACTGGCTTAAAGGGCAAGGGTTTAGATACAAC
AGCCCTACGAACATTCAAAACTACATGCTAGATTCCTTGTATCAAATTAATGATAGTAATAAGATCACTGCTTTTTTCCA
ATACTATAATTATTTTATGGCAGACCCCGGATCTTTAGGCATAGAAGCGTATAATCAAAATCGTTTTCAAAACAACCGCC
CTAATAACAATAAAAGCGGGAGAGCGAAGCGATGGGGAGCTGTGTATCAAAACTTTTTTGGGGATACGGACAAAATAGGT
GGGGATTTCACTTTTAGTTACTATGGGCATGACATGTCAAGGGATTTTCAATTTGATTCTAATTTTTTGAATGTCAATAC
CAATCCTAAATTAGGCCCTGTTTATACCGATCAAAATTATCCAGGATTTTTTATTTTTGATCATTTAAGGCGTTACATAA
TGAACGCTTTTGAGCCTAATTTGAACTTAGTTGTCAATACCAATAAAGTTAAGCAAACTTTTAATGTGGGCATGCGTTTT
ATGACAATGGATATGTATTTCAGATTGGATCAAAGCACATGCGAAAAAACCGATATTTTTAATGGGGTGTGCCGCATGCC
TCCTTTTGTTCTTTCTAAAAAACCCAGCAACAATCAAAACCTGTTTAACAACTATACAGCGGTATGGTTGAGCGATAAAA
TAGAGCTTTTTGATTCTAAATTGGTGATAACTCCAGGGCTTAGATACACTTTTTTGAACTATAACAACAAAGAGCCAGAA
AAGCATGATTTTTCTGTGTGGAATATTACAAAAAAGCGTCAAAACGAATGGAGTCCCGCCCTTAACATTGGCTATAAACC
TATGGAAAATTGGATATGGTATGCGAACTACCGCCGCAGTTTTATCCCCCCACAACATACAATGCTAGGCATTACTAGGA
CTAATTACAACCAAATTTTTAATGAAATTGAAGTGGGGCAACGCTATAGTTATAAAAATCTATTGAGCTTTAACACGAAT
TATTTTGTGATTTTTGCCAAGCGTTACTATGCGGGAGGCTATAGCCCACAGCCTATTAACGCTAGGAGTCAAGGGGTAGA
ATTGGAATTGTATTACGCGCCGATTAGGGGTTTGCAATTCCATGTGGCTTACACCTATATTGATGCACGCATCACTTCTA
ACGCTGATGATATTGCTTATTATTTTACAGGCATTGTCAATAAACCCTTTGACATTAAAGGGAAGCGTTTGCCTTATGTG
AGTCCTAACCAATTCATATTTGACATGATGTATACTTACAAGCACACGACTTTTGGTATTAGCAGCTATTTTTATAGCCG
TGCTTATAGTTCTATGCTCAATCAGGCCAAAAGCCAAACCGTGTGCCTGCCCTTAAACCCAGAATACACAGGGGGGCTAG
AGTATGGTTGTAATTCAGTAGGGTTATTGCCCTTGTATTTTGTGTTGAACGTTCAAGTAAGCTCGGTTTTATGGCAAAGC
GGTAGGCATAAAATCACAGGGAGTTTGCAAATCAATAATCTTTTTAACATGAAGTATTATTTTAGGGGAATTGGCACAAG
CCCTACAGGAAGAGAGCCCGCACCAGGGCGATCCATTACAGCGTATTTGAATTATGAGTTTTAA

Upstream 100 bases:

>100_bases
TCTAAATAATAATTTTTCAAAAATTTAAGCTAAAACTAATAATGGTTATTATAAATTTCACATTGTTGTAAAAAAGAACA
TTTTTCATAAAAGGTGGTAA

Downstream 100 bases:

>100_bases
ACTAGCTTCAAGCTTTTATCGCTTGAATGCTTGTTAATATCAAACCATTTTAAAACTCGCCACTAAATTTTCGGTCAATA
AATTAAACCCATCTACCAGA

Product: iron(III) dicitrate transport protein (fecA)

Products: NA

Alternate protein names: Iron(III) dicitrate transport protein fecA [H]

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINDSNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF
MTMDMYFRLDQSTCEKTDIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWNITKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFAKRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF

Sequences:

>Translated_767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINDSNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF
MTMDMYFRLDQSTCEKTDIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWNITKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFAKRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
>Mature_767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINDSNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYPGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRF
MTMDMYFRLDQSTCEKTDIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWNITKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFAKRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF

Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]

COG id: COG4772

COG function: function code P; Outer membrane receptor for Fe3+-dicitrate

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1790743, Length=721, Percent_Identity=22.8848821081831, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 87699; Mature: 87699

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQ
CCHHHEEHHHHHCCCCEEECCCCHHHECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH
LTKSANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYV
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEE
APYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWESQVSERA
EEEEEEEEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHH
TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC
SPTNIQNYMLDSLYQINDSNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSG
CCCCHHHHHHHHHEEECCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC
PGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRFMTMDMYFRLDQSTCEKTDIF
CCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHH
NGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
CCHHCCCCCEEECCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCCEEEEEECCCCCCC
KHDFSVWNITKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIF
CCCCEEEEEEHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHH
NEIEVGQRYSYKNLLSFNTNYFVIFAKRYYAGGYSPQPINARSQGVELELYYAPIRGLQF
HHHHHCCCCCCHHHEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
HVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKHTTFGI
EEEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
SSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHC
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQ
CCHHHEEHHHHHCCCCEEECCCCHHHECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH
LTKSANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYV
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEE
APYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWESQVSERA
EEEEEEEEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHH
TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC
SPTNIQNYMLDSLYQINDSNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSG
CCCCHHHHHHHHHEEECCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC
PGFFIFDHLRRYIMNAFEPNLNLVVNTNKVKQTFNVGMRFMTMDMYFRLDQSTCEKTDIF
CCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHH
NGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
CCHHCCCCCEEECCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCCEEEEEECCCCCCC
KHDFSVWNITKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIF
CCCCEEEEEEHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHH
NEIEVGQRYSYKNLLSFNTNYFVIFAKRYYAGGYSPQPINARSQGVELELYYAPIRGLQF
HHHHHCCCCCCHHHEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
HVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKHTTFGI
EEEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
SSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHC
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]