| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645223
GI number: 15645223
Start: 632820
End: 633941
Strand: Reverse
Name: Not Available
Synonym: HP0598
Alternate gene names: 15645223
Gene position: 633941-632820 (Counterclockwise)
Preceding gene: 15645224
Following gene: 15645222
Centisome position: 38.01
GC content: 38.24
Gene sequence:
>1122_bases ATGTTTTCTAAATCTTTAGAAGCCCTACACCATGCCAAACGCTACCGCAAAAGAGAGTTGTTTGACCCTTTATTAAAGGA TTACGCTTCTAATGATTATTTGGGTTTGAGCGTTAAAAAAGACTTGCTTCAAAACGCTTTTAATAAGCTCCAATCCTTTG TTTCTCATTCCCCCAAGGCTTCCATGCTAGTGAATGGCTACCACCCTTTGCATGCAGAATTGGAAGAGCGATTAGCCAAT TTGTTGGGGTTTGAAAGCGCTCTTTTAGTGGGGAGTGGTTTTTTGGGCAATCTGGCTTTAATAGACACCCTTTTAGTCAA AAACGCCCTCTTATTCATGGATGCACACTACCATGCGAGCGGGATCTTTAGCACCAAGATTAAGCCTAATCAAGTGATCT TTTTTTCACACAATGATATTAAAGATTTGAAACAAAAACTCTTTAACGCCCCTAAAAATAAGATCAAATTCATCGCCATT GAGGGGGTTTATTCTATGGATGCGAGCGTCGCTCCTTATGATTTTTATGCAATCATTCAAGAGATTCCTAACGCTTTTTT AATCGTTGATGAAGCCCATAGTTTTGGGACTATCGGCGAGAATTTATTGGGTTTTTTAGAATATTATCGCATCAAAGAAA AGGACAAAATCATTAAACTCAGCACTTTCTCTAAAGCGCTTGCGAGCTATGGGGCGTGTATTTTAGCCCCCTTACAAACC ATAGAGTTTTTAACCAATCGCGCTAAAAGCGTGATTTACACCACCGCTTTAAGCCTGTTAGACACCGCTTTGACTTTGGC CCATTTAGAATACTTTATTGTGCAAAAACAAGAATTAAAAAATGAGCTTAGCAAACACCAACAGATTATTTTTGAAACTT TAGGTATTAGAACGCTCGCAGGATTTTTTACTTTAGAATTTGAAAGCAATCCCGCTCTTTTAAACGCTCATCATTTTTTG AAAGAAAAGGGGTTTTTAGTGGGAGCTATCCGCCCTCCTACGGTTTCTAAACCCCTTTTACGAGTCTCTTTATCCCTCAA AAACAGCTTAGAAGACACTAAAGAGCTTGCGAACACCCTTTTAAATTATTCTAAAATACAATCTTCTTTTAAGAGTGGTT AA
Upstream 100 bases:
>100_bases GAAAATATTGATAAGATGTTTTACGAAAAACAAGATGAACTCAATAAAATCATTGAAAAAATTCAAAAAGGCGAATGATT TTATTCAATGAAGTGTTTTG
Downstream 100 bases:
>100_bases ATGCTAAAAAAGATTTTTTATGGTTTTATCGTTTTATTTTTGATTGTCATGGGGTTATTAGCCATTCTTATCGCTCAAGT TTGGGTAACTACGGATAAGG
Product: 8-amino-7-oxononanoate synthase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MFSKSLEALHHAKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFNKLQSFVSHSPKASMLVNGYHPLHAELEERLAN LLGFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKIKFIAI EGVYSMDASVAPYDFYAIIQEIPNAFLIVDEAHSFGTIGENLLGFLEYYRIKEKDKIIKLSTFSKALASYGACILAPLQT IEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIVQKQELKNELSKHQQIIFETLGIRTLAGFFTLEFESNPALLNAHHFL KEKGFLVGAIRPPTVSKPLLRVSLSLKNSLEDTKELANTLLNYSKIQSSFKSG
Sequences:
>Translated_373_residues MFSKSLEALHHAKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFNKLQSFVSHSPKASMLVNGYHPLHAELEERLAN LLGFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKIKFIAI EGVYSMDASVAPYDFYAIIQEIPNAFLIVDEAHSFGTIGENLLGFLEYYRIKEKDKIIKLSTFSKALASYGACILAPLQT IEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIVQKQELKNELSKHQQIIFETLGIRTLAGFFTLEFESNPALLNAHHFL KEKGFLVGAIRPPTVSKPLLRVSLSLKNSLEDTKELANTLLNYSKIQSSFKSG >Mature_373_residues MFSKSLEALHHAKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFNKLQSFVSHSPKASMLVNGYHPLHAELEERLAN LLGFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKIKFIAI EGVYSMDASVAPYDFYAIIQEIPNAFLIVDEAHSFGTIGENLLGFLEYYRIKEKDKIIKLSTFSKALASYGACILAPLQT IEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIVQKQELKNELSKHQQIIFETLGIRTLAGFFTLEFESNPALLNAHHFL KEKGFLVGAIRPPTVSKPLLRVSLSLKNSLEDTKELANTLLNYSKIQSSFKSG
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4758668, Length=240, Percent_Identity=29.5833333333333, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI284448556, Length=357, Percent_Identity=24.0896358543417, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI7657118, Length=357, Percent_Identity=24.0896358543417, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI83977444, Length=348, Percent_Identity=28.448275862069, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI83977440, Length=348, Percent_Identity=28.448275862069, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI83977442, Length=348, Percent_Identity=28.448275862069, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI119220554, Length=254, Percent_Identity=25.1968503937008, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI4502025, Length=265, Percent_Identity=27.5471698113208, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI40316939, Length=265, Percent_Identity=27.5471698113208, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1786993, Length=347, Percent_Identity=29.1066282420749, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1790046, Length=333, Percent_Identity=27.6276276276276, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32566772, Length=202, Percent_Identity=29.2079207920792, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560912, Length=198, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560914, Length=198, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71994529, Length=240, Percent_Identity=27.5, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71982617, Length=180, Percent_Identity=26.1111111111111, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71982625, Length=180, Percent_Identity=26.1111111111111, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320438, Length=384, Percent_Identity=26.8229166666667, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320267, Length=256, Percent_Identity=27.34375, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24662918, Length=357, Percent_Identity=25.4901960784314, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI17137420, Length=285, Percent_Identity=29.4736842105263, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI17136286, Length=197, Percent_Identity=28.9340101522843, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24653280, Length=219, Percent_Identity=23.7442922374429, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24653276, Length=219, Percent_Identity=23.7442922374429, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24653278, Length=219, Percent_Identity=23.7442922374429, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 41939; Mature: 41939
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKSLEALHHAKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFNKLQSFVSHSPKA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCC SMLVNGYHPLHAELEERLANLLGFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHAS CEEECCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCC GIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKIKFIAIEGVYSMDASVAPYDFYAIIQ CEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHHHHH EIPNAFLIVDEAHSFGTIGENLLGFLEYYRIKEKDKIIKLSTFSKALASYGACILAPLQT HCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHH IEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIVQKQELKNELSKHQQIIFETLGIRTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFFTLEFESNPALLNAHHFLKEKGFLVGAIRPPTVSKPLLRVSLSLKNSLEDTKELANTL HEEEEEECCCCCEEHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNYSKIQSSFKSG HHHHHHHHHHCCC >Mature Secondary Structure MFSKSLEALHHAKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFNKLQSFVSHSPKA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCC SMLVNGYHPLHAELEERLANLLGFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHAS CEEECCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCC GIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKIKFIAIEGVYSMDASVAPYDFYAIIQ CEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHHHHH EIPNAFLIVDEAHSFGTIGENLLGFLEYYRIKEKDKIIKLSTFSKALASYGACILAPLQT HCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHHH IEFLTNRAKSVIYTTALSLLDTALTLAHLEYFIVQKQELKNELSKHQQIIFETLGIRTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFFTLEFESNPALLNAHHFLKEKGFLVGAIRPPTVSKPLLRVSLSLKNSLEDTKELANTL HEEEEEECCCCCEEHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNYSKIQSSFKSG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]