| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645122
GI number: 15645122
Start: 521862
End: 522122
Strand: Reverse
Name: Not Available
Synonym: HP0495
Alternate gene names: NA
Gene position: 522122-521862 (Counterclockwise)
Preceding gene: 15645123
Following gene: 15645119
Centisome position: 31.3
GC content: 33.72
Gene sequence:
>261_bases ATGCCATCTGATTCAAAAAAACCCACCATTATTTACCCTTGCCTTTGGGATTATAGGGTGATTATGACCACTAAAGATAC AAGCACGTTAAAAGAGCTTTTAGAAACCTACCAACGCCCCTTTAAATTGGAATTTAAAAACACTTCTAAAAACGCTAAGT TTTATAGCTTCAATGTTTCTATGGAAGTTTCAAACGAATCAGAACGGAACGAGATTTTTCAAAAAATTTCACAATTAGAC AAAGTGGTTCAAACGCTTTAA
Upstream 100 bases:
>100_bases AAGCCTTTTAAAGTCTTTGCTTCAGAGATCAAGTTTGGCTTTGTCAATCGCTCCACATACAGCCCTATTGCCATTCCTAA ATTGTTTAAGGAGCTGCTCA
Downstream 100 bases:
>100_bases TCCTTTAAAACAAACGCTTTAAATTTTTCACCCCTTTCTTTATACGAAGAAAATTGATCCAAACTGGCTGCACTAGGTGA AAGCAAAGCGATTTCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVSMEVSNESERNEIFQKISQLD KVVQTL
Sequences:
>Translated_86_residues MPSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVSMEVSNESERNEIFQKISQLD KVVQTL >Mature_85_residues PSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVSMEVSNESERNEIFQKISQLDK VVQTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.jejuni CJ0253
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y495_HELPY (O25237)
Other databases:
- EMBL: AE000511 - PIR: G64581 - RefSeq: NP_207292.1 - PDB: 2H9Z - PDB: 2JOQ - PDBsum: 2H9Z - PDBsum: 2JOQ - ProteinModelPortal: O25237 - SMR: O25237 - DIP: DIP-3435N - MINT: MINT-165537 - GeneID: 899257 - GenomeReviews: AE000511_GR - KEGG: hpy:HP0495 - NMPDR: fig|85962.1.peg.490 - TIGR: HP_0495 - HOGENOM: HBG707383 - OMA: ERNEIFQ - ProtClustDB: CLSK496069 - InterPro: IPR007454
Pfam domain/function: PF04359 DUF493
EC number: NA
Molecular weight: Translated: 10193; Mature: 10062
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVS CCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEE MEVSNESERNEIFQKISQLDKVVQTL EEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSDSKKPTIIYPCLWDYRVIMTTKDTSTLKELLETYQRPFKLEFKNTSKNAKFYSFNVS CCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEE MEVSNESERNEIFQKISQLDKVVQTL EEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185