Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645119

GI number: 15645119

Start: 518573

End: 519409

Strand: Reverse

Name: Not Available

Synonym: HP0492

Alternate gene names: NA

Gene position: 519409-518573 (Counterclockwise)

Preceding gene: 15645122

Following gene: 15645118

Centisome position: 31.14

GC content: 34.77

Gene sequence:

>837_bases
ATGGAGCGTTCGCTTATTTTTAAAAAAGTTAGAATTTATTCTAAAATGTTAGTGGCTTTAGGGCTTTCAAGCGTGTTGAT
CGGTTGCGCGATGAATCCAAGCGCTGAAACAAAAACACCAAATGACGCCAAAAATCAAGTTCAAACTCATGAAAGAATGA
AAACAAGCTCTGAACATGTTACGCCGCTAGATTTTAATTATCCGATACATATTGTTCAAGCCCCACAAAACCACCATGTT
GTAGGTATTTTAACACCGCGCATTCAAGTGAGCGATAATCTAAAACCCTATATTGATAAGTTTCAAGACGCTTTAATTAA
TCAAATCCAAACTATTTTTGAAAAAAGAGGCTATCAAGTGTTGCGTTTTCAAGATGAAAAAGCTTTAAATGCGCAAGATA
AGAGAAAGATTTTTTCCGTTTTGGATTTGAAAGGGTGGGTAGGAATCTTAGAAGATTTGAAAATGAATTTAAAAGATCCC
AATAATCCTAATTTAGACACGCTAGTGGATCAAAGCTCAGGCTCTGTGTGGTTTAATTTTTATGAGCCAGAAAGCAATCG
TGTAGTCCATGATTTTGCTGTGGAAGTAGGGACTTTTCAGGCAATGACCTATACTTACAAACACAATAATTCTGGAGGGC
TTAATTCTTCAAACAGCATTATCCATGAATATTTGGAAAAGAATAAAGAAGATGCGATACATAAGATCTTAAACAGAATG
TATGCGGTTGTCATGAAAAAAGCTGTAACAGAACTTACAAAAGAAAATATTGACAAATACAGAGAGGCTATTGATAGAAT
GAAAGGCTTTAAAAGTTCTATGCCTCAAAAAAAGTAG

Upstream 100 bases:

>100_bases
TGAAATTTAGAAAAAAGAAAATTGTAGCGCAAATTGATTTACTTAAAAATAGCATGAATAGGGTAGGATAGAAGCTTATT
TTAATTTTTAGGAATCTTTT

Downstream 100 bases:

>100_bases
TTCTTAAACAAACCATTTAAAAATTAGCCTTAAAATCAGTCTTTTTAAAGGCTATTTTAAGTATAATGCAAAGTTTATTT
CAATAATTAAGGATACACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK

Sequences:

>Translated_278_residues
MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK
>Mature_278_residues
MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV
VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP
NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM
YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31948; Mature: 31948

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
TPLDFNYPIHIVQAPQNHHVVGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQV
CEECCCCCEEEEECCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
LRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDPNNPNLDTLVDQSSGSVWFNF
EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEE
YEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM
ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
TPLDFNYPIHIVQAPQNHHVVGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQV
CEECCCCCEEEEECCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE
LRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDPNNPNLDTLVDQSSGSVWFNF
EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEE
YEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM
ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA