| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645119
GI number: 15645119
Start: 518573
End: 519409
Strand: Reverse
Name: Not Available
Synonym: HP0492
Alternate gene names: NA
Gene position: 519409-518573 (Counterclockwise)
Preceding gene: 15645122
Following gene: 15645118
Centisome position: 31.14
GC content: 34.77
Gene sequence:
>837_bases ATGGAGCGTTCGCTTATTTTTAAAAAAGTTAGAATTTATTCTAAAATGTTAGTGGCTTTAGGGCTTTCAAGCGTGTTGAT CGGTTGCGCGATGAATCCAAGCGCTGAAACAAAAACACCAAATGACGCCAAAAATCAAGTTCAAACTCATGAAAGAATGA AAACAAGCTCTGAACATGTTACGCCGCTAGATTTTAATTATCCGATACATATTGTTCAAGCCCCACAAAACCACCATGTT GTAGGTATTTTAACACCGCGCATTCAAGTGAGCGATAATCTAAAACCCTATATTGATAAGTTTCAAGACGCTTTAATTAA TCAAATCCAAACTATTTTTGAAAAAAGAGGCTATCAAGTGTTGCGTTTTCAAGATGAAAAAGCTTTAAATGCGCAAGATA AGAGAAAGATTTTTTCCGTTTTGGATTTGAAAGGGTGGGTAGGAATCTTAGAAGATTTGAAAATGAATTTAAAAGATCCC AATAATCCTAATTTAGACACGCTAGTGGATCAAAGCTCAGGCTCTGTGTGGTTTAATTTTTATGAGCCAGAAAGCAATCG TGTAGTCCATGATTTTGCTGTGGAAGTAGGGACTTTTCAGGCAATGACCTATACTTACAAACACAATAATTCTGGAGGGC TTAATTCTTCAAACAGCATTATCCATGAATATTTGGAAAAGAATAAAGAAGATGCGATACATAAGATCTTAAACAGAATG TATGCGGTTGTCATGAAAAAAGCTGTAACAGAACTTACAAAAGAAAATATTGACAAATACAGAGAGGCTATTGATAGAAT GAAAGGCTTTAAAAGTTCTATGCCTCAAAAAAAGTAG
Upstream 100 bases:
>100_bases TGAAATTTAGAAAAAAGAAAATTGTAGCGCAAATTGATTTACTTAAAAATAGCATGAATAGGGTAGGATAGAAGCTTATT TTAATTTTTAGGAATCTTTT
Downstream 100 bases:
>100_bases TTCTTAAACAAACCATTTAAAAATTAGCCTTAAAATCAGTCTTTTTAAAGGCTATTTTAAGTATAATGCAAAGTTTATTT CAATAATTAAGGATACACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK
Sequences:
>Translated_278_residues MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK >Mature_278_residues MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHVTPLDFNYPIHIVQAPQNHHV VGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDP NNPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31948; Mature: 31948
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC TPLDFNYPIHIVQAPQNHHVVGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQV CEECCCCCEEEEECCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE LRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDPNNPNLDTLVDQSSGSVWFNF EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEE YEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MERSLIFKKVRIYSKMLVALGLSSVLIGCAMNPSAETKTPNDAKNQVQTHERMKTSSEHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC TPLDFNYPIHIVQAPQNHHVVGILTPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQV CEECCCCCEEEEECCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEE LRFQDEKALNAQDKRKIFSVLDLKGWVGILEDLKMNLKDPNNPNLDTLVDQSSGSVWFNF EEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEE YEPESNRVVHDFAVEVGTFQAMTYTYKHNNSGGLNSSNSIIHEYLEKNKEDAIHKILNRM ECCCCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH YAVVMKKAVTELTKENIDKYREAIDRMKGFKSSMPQKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA