| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645099
GI number: 15645099
Start: 492809
End: 494059
Strand: Reverse
Name: Not Available
Synonym: HP0471
Alternate gene names: 15645099
Gene position: 494059-492809 (Counterclockwise)
Preceding gene: 15645100
Following gene: 15645098
Centisome position: 29.62
GC content: 36.69
Gene sequence:
>1251_bases ATGGAAAACAGCACACTTTATATTGTTATTGCTGGCTTATGGCTTGCTGTGGGCTTTGGAATCTTTTTAAAGAAATTAGA CATGCCTGTTATCATTGGTTACATTTGCACAGGAACGGTCTTAGCGGCTTTTTTTAAAATTAATGATTTTGATTTGTTGT CTGATATTGGCGAATTTGGTATCGTCTTTTTAATGTTTATGATAGGCATTGAGTTTAATTTTGACAAGCTCAAATCCATC AAACAAGAAGTGCTGGTTTTTGGGCTTTTACAAGTGGTTTTATGCGCTTTAATCGCTTTTTTATTGGGGTATTTTGTTTT GGGTCTTTCACCCATTTTTTCCCTTGTTTTAGGCATGGGGCTTTCGCTCTCTTCAACCGCTATTGTGCTGAAATTCTTTG AAGATTCCAAACAGCTTAGCACGCCCATGGGAAAGAGCGCGGTGGGGATTTTGATTTTCCAAGATATTGCAGCCATTCCC ATGCTTTTAATCCTCACTATTCTAGGTAGTAAAGATTCTAATGTTAATTTACTCATTCTTAAAACCTTTATTTCAGCAGG GATTATTTTAGTTCTTTTATTATTGCCTGGAAAAAAAGGGGCTAATCTCATCTTAGAGCAAGCAAAAGACACGCGCCTGC CTGAAATTTTTATAGGCACGATTTTAGTGATTGTTTGCAGCGCAGCAGGGTTGAGCCATTTTTTTGGGTTTTCTATGTCT TTAGGAGCGTTCATTGTGGGCATGGCCATTTCTAAATCGCGCTATAAAATCAATGTCCAAGAAGAATTCGCGCAATTAAA AAACCTCTTCTTGGCCCTTTTTTTCATTACGATAGGGATGCAAATTAATGTGAGTTTCTTTATGGAGAAATTCTTTGTTG TCATCTTCTTACTCATTTTAGTGATGGGTTTTAAGACGGCTATCATTTATGCGCTTTTGCGTTTTTTTAGAGACGCTAAA ACTGCCATAAAAACCGCTCTTTCTTTGGCGCAAATCGGGGAGTTTTCTTTTGTTATCTTTTTAAATTCAGGCTCGCACCA GCTCTTTAATTTGCAAGAAAAAAAAGGGATTCTTGGTTTTTTGCACCAAAAAAATATCTTAAATATCGCTCAAAATGACA TCCACCAACTCCTTATCCTCATGGTGGTCTTTTCTATGTTGGCAACCCCTTTTATTTTAAAATACCTAGAATCTATCGCT CAATTTATTTTGCACCAAAAGAGCCAAGAAAATGAGCCGGCTAAAAAATAA
Upstream 100 bases:
>100_bases TATTATTTTGTTCAATAGTGTTATTTAATGGATCAATTTAATAGGATAGTTTCGCTTTTATTTCTTTAAAACAAATTGAT TCTACTGGGGAAAGGTTTTT
Downstream 100 bases:
>100_bases TGGCGCAAAAACCAAATGATAAGTTTGCTTGTATTGTGAGTGTTATGTTAAAATACAAGCATATTTTAACTCCAAATTGA TATAAAAAGGGGATTTCATG
Product: glutathione-regulated potassium-efflux system protein (kefB)
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MENSTLYIVIAGLWLAVGFGIFLKKLDMPVIIGYICTGTVLAAFFKINDFDLLSDIGEFGIVFLMFMIGIEFNFDKLKSI KQEVLVFGLLQVVLCALIAFLLGYFVLGLSPIFSLVLGMGLSLSSTAIVLKFFEDSKQLSTPMGKSAVGILIFQDIAAIP MLLILTILGSKDSNVNLLILKTFISAGIILVLLLLPGKKGANLILEQAKDTRLPEIFIGTILVIVCSAAGLSHFFGFSMS LGAFIVGMAISKSRYKINVQEEFAQLKNLFLALFFITIGMQINVSFFMEKFFVVIFLLILVMGFKTAIIYALLRFFRDAK TAIKTALSLAQIGEFSFVIFLNSGSHQLFNLQEKKGILGFLHQKNILNIAQNDIHQLLILMVVFSMLATPFILKYLESIA QFILHQKSQENEPAKK
Sequences:
>Translated_416_residues MENSTLYIVIAGLWLAVGFGIFLKKLDMPVIIGYICTGTVLAAFFKINDFDLLSDIGEFGIVFLMFMIGIEFNFDKLKSI KQEVLVFGLLQVVLCALIAFLLGYFVLGLSPIFSLVLGMGLSLSSTAIVLKFFEDSKQLSTPMGKSAVGILIFQDIAAIP MLLILTILGSKDSNVNLLILKTFISAGIILVLLLLPGKKGANLILEQAKDTRLPEIFIGTILVIVCSAAGLSHFFGFSMS LGAFIVGMAISKSRYKINVQEEFAQLKNLFLALFFITIGMQINVSFFMEKFFVVIFLLILVMGFKTAIIYALLRFFRDAK TAIKTALSLAQIGEFSFVIFLNSGSHQLFNLQEKKGILGFLHQKNILNIAQNDIHQLLILMVVFSMLATPFILKYLESIA QFILHQKSQENEPAKK >Mature_416_residues MENSTLYIVIAGLWLAVGFGIFLKKLDMPVIIGYICTGTVLAAFFKINDFDLLSDIGEFGIVFLMFMIGIEFNFDKLKSI KQEVLVFGLLQVVLCALIAFLLGYFVLGLSPIFSLVLGMGLSLSSTAIVLKFFEDSKQLSTPMGKSAVGILIFQDIAAIP MLLILTILGSKDSNVNLLILKTFISAGIILVLLLLPGKKGANLILEQAKDTRLPEIFIGTILVIVCSAAGLSHFFGFSMS LGAFIVGMAISKSRYKINVQEEFAQLKNLFLALFFITIGMQINVSFFMEKFFVVIFLLILVMGFKTAIIYALLRFFRDAK TAIKTALSLAQIGEFSFVIFLNSGSHQLFNLQEKKGILGFLHQKNILNIAQNDIHQLLILMVVFSMLATPFILKYLESIA QFILHQKSQENEPAKK
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=359, Percent_Identity=28.4122562674095, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786232, Length=395, Percent_Identity=28.8607594936709, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1789749, Length=392, Percent_Identity=27.0408163265306, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1786685, Length=369, Percent_Identity=26.5582655826558, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 46097; Mature: 46097
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSTLYIVIAGLWLAVGFGIFLKKLDMPVIIGYICTGTVLAAFFKINDFDLLSDIGEFG CCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVFLMFMIGIEFNFDKLKSIKQEVLVFGLLQVVLCALIAFLLGYFVLGLSPIFSLVLGMG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSLSSTAIVLKFFEDSKQLSTPMGKSAVGILIFQDIAAIPMLLILTILGSKDSNVNLLIL CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH KTFISAGIILVLLLLPGKKGANLILEQAKDTRLPEIFIGTILVIVCSAAGLSHFFGFSMS HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFIVGMAISKSRYKINVQEEFAQLKNLFLALFFITIGMQINVSFFMEKFFVVIFLLIL HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VMGFKTAIIYALLRFFRDAKTAIKTALSLAQIGEFSFVIFLNSGSHQLFNLQEKKGILGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHCCCHHHCCHHHH LHQKNILNIAQNDIHQLLILMVVFSMLATPFILKYLESIAQFILHQKSQENEPAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MENSTLYIVIAGLWLAVGFGIFLKKLDMPVIIGYICTGTVLAAFFKINDFDLLSDIGEFG CCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IVFLMFMIGIEFNFDKLKSIKQEVLVFGLLQVVLCALIAFLLGYFVLGLSPIFSLVLGMG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSLSSTAIVLKFFEDSKQLSTPMGKSAVGILIFQDIAAIPMLLILTILGSKDSNVNLLIL CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH KTFISAGIILVLLLLPGKKGANLILEQAKDTRLPEIFIGTILVIVCSAAGLSHFFGFSMS HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFIVGMAISKSRYKINVQEEFAQLKNLFLALFFITIGMQINVSFFMEKFFVVIFLLIL HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VMGFKTAIIYALLRFFRDAKTAIKTALSLAQIGEFSFVIFLNSGSHQLFNLQEKKGILGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHCCCHHHCCHHHH LHQKNILNIAQNDIHQLLILMVVFSMLATPFILKYLESIAQFILHQKSQENEPAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]