| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645051
GI number: 15645051
Start: 438242
End: 439168
Strand: Reverse
Name: Not Available
Synonym: HP0423
Alternate gene names: NA
Gene position: 439168-438242 (Counterclockwise)
Preceding gene: 15645052
Following gene: 15645044
Centisome position: 26.33
GC content: 40.13
Gene sequence:
>927_bases ATGGGTTTTCAAAATGAAAATAAATTAAAAGTAGGGGCGTTAGTCAAAGCCACCATCAATAACAAAGTGGTGGAGGCTAA AGTCATTGGTGTTGGGTTCAATCGTGTAACCTTAAGGAGCGAAAAAGGCAACGAAGCCACTTACGCTTTCAATAGCGATA AGTTCTTAAAATGGTTTAAGGAAGTGCCTTTGAATGAAGTTGCGACTAATCACGTTGAAAAAAGCGGAGATGATTTGTTG AAAAATGTTAAAATCGTTACGAGCGGTCAGAGTGTCAAGGATAGGGCTTCAACTCCTAAAGAGAAAGAGGATAGGTTTAA ACTCGCTTTTGGATTTAAGACTACTGATGATAAGACTAGCTTTGAGATTATTGCGGAGGATTATACTCTCTCCGAGAGAA AAAGTAGGCTCGGTGCGTTATTATCTCCGATGTTTTTTGAGGGTAGCGGTAATCAAGCAACTGCTATCATTCTTACCGCT CTCCATTATGCGAAAGGATTAAATAAACATAGCGATGCGGAGTGGCGTGCGATGATTGATAGCCGAGATGAGGAAAAATG CGAGATTACGACACTTGATAACTTGGATAGAGTTGGAACGACTTTATTCTGTGGCGTGATTAAAGAGTATGCGGAGGGTA ATAAGGAGTTTGAAAAAGAACTTAACGACTTTTCGCCTGATGGTTTTTGGGCGAAGTATTTACCTAAAAACAAAAATGAG GCGATGTTTGTGGCTCAATTAATTTGCGATGGTGGTATCAATAAATATGGCTTAAGCTGTGCGGGCTTAACTCCTGGCGT TTTAGCCGATAATCTTTGGTCTTATGGTATGCGAGATGAGGATTATGATGAGGAGGGTAATGTGATTAGAGAGAGGGATA TTGTTACAGGGGAGGAGTTAAATAATGCGGAGGGTAATGTAGAATAA
Upstream 100 bases:
>100_bases AAGGAGAAACAAGCCATGCCAAAAAGATAAAGAACATTAAAAAACATTGAACGACCGATTATAGCGGAATTTAAAACAAA TTTTTATCAAGGAGTATTTT
Downstream 100 bases:
>100_bases ACCCCCCCCACTCCTAGTGGGGTGGCTCTCCTTTTTTTAATCTCTTTTCTTTTTCTTTTTTCTTTATTGATTTATAGCGA TTAAAGCCGTTTAAATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MGFQNENKLKVGALVKATINNKVVEAKVIGVGFNRVTLRSEKGNEATYAFNSDKFLKWFKEVPLNEVATNHVEKSGDDLL KNVKIVTSGQSVKDRASTPKEKEDRFKLAFGFKTTDDKTSFEIIAEDYTLSERKSRLGALLSPMFFEGSGNQATAIILTA LHYAKGLNKHSDAEWRAMIDSRDEEKCEITTLDNLDRVGTTLFCGVIKEYAEGNKEFEKELNDFSPDGFWAKYLPKNKNE AMFVAQLICDGGINKYGLSCAGLTPGVLADNLWSYGMRDEDYDEEGNVIRERDIVTGEELNNAEGNVE
Sequences:
>Translated_308_residues MGFQNENKLKVGALVKATINNKVVEAKVIGVGFNRVTLRSEKGNEATYAFNSDKFLKWFKEVPLNEVATNHVEKSGDDLL KNVKIVTSGQSVKDRASTPKEKEDRFKLAFGFKTTDDKTSFEIIAEDYTLSERKSRLGALLSPMFFEGSGNQATAIILTA LHYAKGLNKHSDAEWRAMIDSRDEEKCEITTLDNLDRVGTTLFCGVIKEYAEGNKEFEKELNDFSPDGFWAKYLPKNKNE AMFVAQLICDGGINKYGLSCAGLTPGVLADNLWSYGMRDEDYDEEGNVIRERDIVTGEELNNAEGNVE >Mature_307_residues GFQNENKLKVGALVKATINNKVVEAKVIGVGFNRVTLRSEKGNEATYAFNSDKFLKWFKEVPLNEVATNHVEKSGDDLLK NVKIVTSGQSVKDRASTPKEKEDRFKLAFGFKTTDDKTSFEIIAEDYTLSERKSRLGALLSPMFFEGSGNQATAIILTAL HYAKGLNKHSDAEWRAMIDSRDEEKCEITTLDNLDRVGTTLFCGVIKEYAEGNKEFEKELNDFSPDGFWAKYLPKNKNEA MFVAQLICDGGINKYGLSCAGLTPGVLADNLWSYGMRDEDYDEEGNVIRERDIVTGEELNNAEGNVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34417; Mature: 34286
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFQNENKLKVGALVKATINNKVVEAKVIGVGFNRVTLRSEKGNEATYAFNSDKFLKWFK CCCCCCCCEEEHEEEEEECCCEEEEEEEEEECCCEEEEECCCCCCEEEEECCHHHHHHHH EVPLNEVATNHVEKSGDDLLKNVKIVTSGQSVKDRASTPKEKEDRFKLAFGFKTTDDKTS HCCHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCC FEIIAEDYTLSERKSRLGALLSPMFFEGSGNQATAIILTALHYAKGLNKHSDAEWRAMID EEEEECCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHC SRDEEKCEITTLDNLDRVGTTLFCGVIKEYAEGNKEFEKELNDFSPDGFWAKYLPKNKNE CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCC AMFVAQLICDGGINKYGLSCAGLTPGVLADNLWSYGMRDEDYDEEGNVIRERDIVTGEEL HHHHHHHHHCCCCCHHCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC NNAEGNVE CCCCCCCC >Mature Secondary Structure GFQNENKLKVGALVKATINNKVVEAKVIGVGFNRVTLRSEKGNEATYAFNSDKFLKWFK CCCCCCCEEEHEEEEEECCCEEEEEEEEEECCCEEEEECCCCCCEEEEECCHHHHHHHH EVPLNEVATNHVEKSGDDLLKNVKIVTSGQSVKDRASTPKEKEDRFKLAFGFKTTDDKTS HCCHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCC FEIIAEDYTLSERKSRLGALLSPMFFEGSGNQATAIILTALHYAKGLNKHSDAEWRAMID EEEEECCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHC SRDEEKCEITTLDNLDRVGTTLFCGVIKEYAEGNKEFEKELNDFSPDGFWAKYLPKNKNE CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCC AMFVAQLICDGGINKYGLSCAGLTPGVLADNLWSYGMRDEDYDEEGNVIRERDIVTGEEL HHHHHHHHHCCCCCHHCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC NNAEGNVE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA