| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645052
GI number: 15645052
Start: 439284
End: 441143
Strand: Reverse
Name: Not Available
Synonym: HP0424
Alternate gene names: NA
Gene position: 441143-439284 (Counterclockwise)
Preceding gene: 15645053
Following gene: 15645051
Centisome position: 26.45
GC content: 38.01
Gene sequence:
>1860_bases ATGTTATTGGATTATGATTTTTTATTGTTATTGAATGATGAGAGCGGGAAGCCAACCAGATACTACTATTTGTTACAAGA TTTTGAAAAGGATTTTGTGGCTAGGGAAGTGGCTCAAAATAAAACGAAGCGATTCGTTAAGGAGATCATTGGGAGCGAGA AAGCCTCTAAAACTAAAAACAGCGCCATTGAAGTTTCCAACACGAAAGCTTCTGCTATGAAGAACGAAACGATTGGAAGC GGCGATCTTAAAAAGGTGTGTGAGAAAATCAAAAGCGCACTACCCTTTGGGATCATCTCAGCCTTTAAACCCTTTAAAGA CGCTTTTTACAGAGATTTCAATCATAATGAGCAAAAGTTACTGATAGGGGCAGCTAAAAGCGGTTGCATTCAATCTAGCG CTGATAAACTGGCTCAGTTAAAAACGCGCTTACTCTACTGGCAAGACAAATCTGTTAAAGTGGATTGGGATAAACCCATT TTAATCAAGGACTTCTTTAAAGGCAATAATTACCTTTATAGGAGGTTTTGTTTTTTATTGGGGAAGCATTTTATGGACAG ATTTTTAAAGAATAACGCTAAGGCGAGCGTGAAAGACTTTATGTCTAGTAAGGAGTTTGTCGCTAAATACCGATACACCC CCAAGCAAAATACAGAAAGAGCGAAAAAGCTGCAATCGTATTTAGAGAATAAGCGCGATTTTATAGGGTTTGTTCAAGCG CTTAACTCTTTAAAAGACAACCCGCAAGATCCTTTTTTACCCAATGAAGAAACGAGCTTTTTGGTGTTCGCTAATGAGCC TACTATCGTGTTTAATTTAAGGGATTATTTATTGGTGTTAGCGCAAATCTTTAACCAACAAGCGATCTGTTATTGTGAAA GCAAATGCCCTATAGAATTGATCAACGCTTCACCGGGTAAGGACTTTAACAAGACACAAGACAGCTTCCCAGACATCAAA TTCTCAACACCCAATCAGTTAGAACAATCCCTCAACGCTCTTAAAAACAAGCTAGCCGCATTCTTTTCAAAACACCCTGA TAAACATAACGGCATGGAGTTTAATGAAATAGCTAAAACTCAAATAGAAGCGCTTTATATGCCGCAATCTAGCGATGGTT TTGATGATTTTCGCAAGCATCTTGAAGAGAGTATTAAAAGTTTTATCAGAGCGAAAAAAAATCGTTATGGTTTTCCTAAA ATCTTTGATGTTGCAGACATAGAACAAGAAGAGAGAAAAGTCATTGAATGGCGAGAAAAAGAGAGAGCGTCAAAACAAAG CTATAAACAAAACCTTCAAATCAACAAAATCGCTAACGATTTAAAGCGTGATAAGGTAGTGGATAAAAGAACGATTTTAA GCGTGATAGACGCTGATTTAGATCGTGGTTTTATCCCGCCTAAAGACTTGTTAAAGCAATTAGAAAAAATCAGCGCTTCT CTTTCTAAAGACATCGTAATAGCGATAAAGCAAGTAGAAAAATTAGAGCTTAGCTATGCGCTAATAGACAATATCCAACA CAACACGCTTGATGACACGCTTGATTTTACCTTTATTGTTGGGGATTCTTTGAGCGTTCAGTCGCTTTATGTTACCTTTG ATCTGGTGATTGACATGGATAGGCCTATGAGCGAGCAGTTCCTCAACCATATTGGGGAATTGGGGAGTTTTGAATCTAGA GAGCGAGCGTTAGAGTGGGTGCGATTATCGCAAGCTAAACTGATCATTGAAACGCCCAGAGAAGCGCTAAAAAATGCGCA ATTATCGCAAATTGAAGAAATATTGACTGGCTGTATTTTTAATGGCGCTTACCGCCTTCAAAACGATCTTAAGGGCAATA GACATGGAAATTTTAAATAA
Upstream 100 bases:
>100_bases GGTTGAGCTTTGCAAAAGAGGATTTTAAAAAAGTGATAAAAAGCTTACAAGCCTTATAAGGTCAAATAACGCTAATGAAT AATTTTAAAAAGGACTTGAC
Downstream 100 bases:
>100_bases AATTCACACCCCAACAAGGAGAAACAAGCCATGCCAAAAAGATAAAGAACATTAAAAAACATTGAACGACCGATTATAGC GGAATTTAAAACAAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVAREVAQNKTKRFVKEIIGSEKASKTKNSAIEVSNTKASAMKNETIGS GDLKKVCEKIKSALPFGIISAFKPFKDAFYRDFNHNEQKLLIGAAKSGCIQSSADKLAQLKTRLLYWQDKSVKVDWDKPI LIKDFFKGNNYLYRRFCFLLGKHFMDRFLKNNAKASVKDFMSSKEFVAKYRYTPKQNTERAKKLQSYLENKRDFIGFVQA LNSLKDNPQDPFLPNEETSFLVFANEPTIVFNLRDYLLVLAQIFNQQAICYCESKCPIELINASPGKDFNKTQDSFPDIK FSTPNQLEQSLNALKNKLAAFFSKHPDKHNGMEFNEIAKTQIEALYMPQSSDGFDDFRKHLEESIKSFIRAKKNRYGFPK IFDVADIEQEERKVIEWREKERASKQSYKQNLQINKIANDLKRDKVVDKRTILSVIDADLDRGFIPPKDLLKQLEKISAS LSKDIVIAIKQVEKLELSYALIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFDLVIDMDRPMSEQFLNHIGELGSFESR ERALEWVRLSQAKLIIETPREALKNAQLSQIEEILTGCIFNGAYRLQNDLKGNRHGNFK
Sequences:
>Translated_619_residues MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVAREVAQNKTKRFVKEIIGSEKASKTKNSAIEVSNTKASAMKNETIGS GDLKKVCEKIKSALPFGIISAFKPFKDAFYRDFNHNEQKLLIGAAKSGCIQSSADKLAQLKTRLLYWQDKSVKVDWDKPI LIKDFFKGNNYLYRRFCFLLGKHFMDRFLKNNAKASVKDFMSSKEFVAKYRYTPKQNTERAKKLQSYLENKRDFIGFVQA LNSLKDNPQDPFLPNEETSFLVFANEPTIVFNLRDYLLVLAQIFNQQAICYCESKCPIELINASPGKDFNKTQDSFPDIK FSTPNQLEQSLNALKNKLAAFFSKHPDKHNGMEFNEIAKTQIEALYMPQSSDGFDDFRKHLEESIKSFIRAKKNRYGFPK IFDVADIEQEERKVIEWREKERASKQSYKQNLQINKIANDLKRDKVVDKRTILSVIDADLDRGFIPPKDLLKQLEKISAS LSKDIVIAIKQVEKLELSYALIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFDLVIDMDRPMSEQFLNHIGELGSFESR ERALEWVRLSQAKLIIETPREALKNAQLSQIEEILTGCIFNGAYRLQNDLKGNRHGNFK >Mature_619_residues MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVAREVAQNKTKRFVKEIIGSEKASKTKNSAIEVSNTKASAMKNETIGS GDLKKVCEKIKSALPFGIISAFKPFKDAFYRDFNHNEQKLLIGAAKSGCIQSSADKLAQLKTRLLYWQDKSVKVDWDKPI LIKDFFKGNNYLYRRFCFLLGKHFMDRFLKNNAKASVKDFMSSKEFVAKYRYTPKQNTERAKKLQSYLENKRDFIGFVQA LNSLKDNPQDPFLPNEETSFLVFANEPTIVFNLRDYLLVLAQIFNQQAICYCESKCPIELINASPGKDFNKTQDSFPDIK FSTPNQLEQSLNALKNKLAAFFSKHPDKHNGMEFNEIAKTQIEALYMPQSSDGFDDFRKHLEESIKSFIRAKKNRYGFPK IFDVADIEQEERKVIEWREKERASKQSYKQNLQINKIANDLKRDKVVDKRTILSVIDADLDRGFIPPKDLLKQLEKISAS LSKDIVIAIKQVEKLELSYALIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFDLVIDMDRPMSEQFLNHIGELGSFESR ERALEWVRLSQAKLIIETPREALKNAQLSQIEEILTGCIFNGAYRLQNDLKGNRHGNFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71525; Mature: 71525
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVAREVAQNKTKRFVKEIIGSEKASKTKN CEECEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC SAIEVSNTKASAMKNETIGSGDLKKVCEKIKSALPFGIISAFKPFKDAFYRDFNHNEQKL CCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEE LIGAAKSGCIQSSADKLAQLKTRLLYWQDKSVKVDWDKPILIKDFFKGNNYLYRRFCFLL EEECCCCCCHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEHHHHHCCCCHHHHHHHHHH GKHFMDRFLKNNAKASVKDFMSSKEFVAKYRYTPKQNTERAKKLQSYLENKRDFIGFVQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNSLKDNPQDPFLPNEETSFLVFANEPTIVFNLRDYLLVLAQIFNQQAICYCESKCPIEL HHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCEEE INASPGKDFNKTQDSFPDIKFSTPNQLEQSLNALKNKLAAFFSKHPDKHNGMEFNEIAKT ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH QIEALYMPQSSDGFDDFRKHLEESIKSFIRAKKNRYGFPKIFDVADIEQEERKVIEWREK HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHH ERASKQSYKQNLQINKIANDLKRDKVVDKRTILSVIDADLDRGFIPPKDLLKQLEKISAS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSKDIVIAIKQVEKLELSYALIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFDLVIDMD HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECC RPMSEQFLNHIGELGSFESRERALEWVRLSQAKLIIETPREALKNAQLSQIEEILTGCIF CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH NGAYRLQNDLKGNRHGNFK CCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVAREVAQNKTKRFVKEIIGSEKASKTKN CEECEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC SAIEVSNTKASAMKNETIGSGDLKKVCEKIKSALPFGIISAFKPFKDAFYRDFNHNEQKL CCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEE LIGAAKSGCIQSSADKLAQLKTRLLYWQDKSVKVDWDKPILIKDFFKGNNYLYRRFCFLL EEECCCCCCHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEHHHHHCCCCHHHHHHHHHH GKHFMDRFLKNNAKASVKDFMSSKEFVAKYRYTPKQNTERAKKLQSYLENKRDFIGFVQA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNSLKDNPQDPFLPNEETSFLVFANEPTIVFNLRDYLLVLAQIFNQQAICYCESKCPIEL HHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHCCCEEEEECCCCCEEE INASPGKDFNKTQDSFPDIKFSTPNQLEQSLNALKNKLAAFFSKHPDKHNGMEFNEIAKT ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH QIEALYMPQSSDGFDDFRKHLEESIKSFIRAKKNRYGFPKIFDVADIEQEERKVIEWREK HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHH ERASKQSYKQNLQINKIANDLKRDKVVDKRTILSVIDADLDRGFIPPKDLLKQLEKISAS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSKDIVIAIKQVEKLELSYALIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFDLVIDMD HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECC RPMSEQFLNHIGELGSFESRERALEWVRLSQAKLIIETPREALKNAQLSQIEEILTGCIF CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHH NGAYRLQNDLKGNRHGNFK CCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA