| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15645008
GI number: 15645008
Start: 390125
End: 391471
Strand: Reverse
Name: Not Available
Synonym: HP0380
Alternate gene names: 15645008
Gene position: 391471-390125 (Counterclockwise)
Preceding gene: 15645009
Following gene: 15645003
Centisome position: 23.47
GC content: 43.95
Gene sequence:
>1347_bases ATGTATGTTGAAAAAATTCTCCAGTCTTTACAGAAAAAATACCCTTATCAAAAAGAGTTCCATCAAGCCGTCTATGAAGC TATCACTTCTTTAAAACCCCTTTTAGACAGCGATAAAAGTTATGAAAAGCATGCGATTTTAGAGCGTTTGATTGAGCCTG AAAGGGAGATTTTTTTTAGGGTGTGTTGGCTAGATGATAACAATCAAATCCAAGTCAATCGGGGGTGTAGGGTTGAGTTT AATTCGGCTATTGGCCCTTATAAGGGGGGTTTGAGATTCCACCCTAGCGTGAATGAAAGCGTGATCAAGTTTTTAGGCTT TGAGCAAGTGTTGAAAAATTCGCTCACCACTTTGGCTATGGGGGGCGCTAAGGGGGGGAGCGATTTTGACCCTAAAGGGA AGAGCGAGCATGAGATCATGCGTTTTTGCCAAGCGTTCATGAATGAATTATACCGCCATATTGGAGCCACGACTGATGTG CCAGCTGGGGATATTGGAGTGGGCGAAAGAGAGATTGGCTATCTGTTTGGGCAATACAAAAAATTAGTCAATCGTTTTGA GGGCGTATTGACCGGTAAAGGACTCACTTATGGAGGGAGCTTGTGCAGAAAAGAAGCTACCGGTTATGGGTGCGTGTATT TTGCTGAAGAAATGTTGCAAGAAAGGAACAGCTCTTTAGAGGGTAAGGTTTGCAGCGTTTCTGGGAGCGGGAATGTCGCA ATTTATACCATTGAAAAATTGCTTCAAATAGGAGCTAAACCGGTAACGGCGAGCGATTCTAATGGCATGATTTATGACAA AGACGGCATTGATTTAGAGCTTTTGAAAGAAATTAAAGAAGTGCGTCGTGGGAGGATCAAAGAATACGCTTTAGAAAAAA AGAGCGCGGAATACACCCCAACAGAAAATTACCCCAAAGGGGGGAATGCGGTGTGGCATGTGCCTTGTTTTGCGGCTTTT CCTAGTGCGACCGAGAATGAATTGAGCGTTTTAGACGCCAAAACCCTCCTTTCTAATGGGTGTAAATGCGTGGCTGAAGG GGCGAACATGCCCTCAAGCAATGAAGCGATTGGATTGTTTTTGCAGGCTAAGATTTCTTATGGTATAGGCAAGGCGGCTA ATGCTGGGGGGGTGAGCGTGAGCGGCTTGGAAATGGCACAAAACGCAAGCATGCACCCTTGGAGTTTTGAAGTGGTGGAT GCGAAATTGCACCATATTATGAAAGAGATTTATAAGAATGTCTCTCAAACCGCTAAAGAGTTTAAAGACCCTACTAATTT TGTATTAGGGGCCAATATCGCTGGTTTTAGAAAAGTAGCGTCTGCGATGATAGCGCAAGGGGTTTGA
Upstream 100 bases:
>100_bases GGTTTGTGGGCGTTTTAAAAAGTTTTTTAAGATAAATTAAAACTTAATTACCCTTTTAGTGTTACAATAAAAACACTTAA AACAATAAAGGATGCCGCTC
Downstream 100 bases:
>100_bases TTACCCCCAATTTTACAAACCCAATTTTTTAACCAACTTTCTCACCGCGCGCAACAAAGGCAAGGATTTTTGATAAGCTT TGCGATAGATTTTAAAAGTG
Product: glutamate dehydrogenase
Products: NA
Alternate protein names: NADP-GDH [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MYVEKILQSLQKKYPYQKEFHQAVYEAITSLKPLLDSDKSYEKHAILERLIEPEREIFFRVCWLDDNNQIQVNRGCRVEF NSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDV PAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVA IYTIEKLLQIGAKPVTASDSNGMIYDKDGIDLELLKEIKEVRRGRIKEYALEKKSAEYTPTENYPKGGNAVWHVPCFAAF PSATENELSVLDAKTLLSNGCKCVAEGANMPSSNEAIGLFLQAKISYGIGKAANAGGVSVSGLEMAQNASMHPWSFEVVD AKLHHIMKEIYKNVSQTAKEFKDPTNFVLGANIAGFRKVASAMIAQGV
Sequences:
>Translated_448_residues MYVEKILQSLQKKYPYQKEFHQAVYEAITSLKPLLDSDKSYEKHAILERLIEPEREIFFRVCWLDDNNQIQVNRGCRVEF NSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDV PAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVA IYTIEKLLQIGAKPVTASDSNGMIYDKDGIDLELLKEIKEVRRGRIKEYALEKKSAEYTPTENYPKGGNAVWHVPCFAAF PSATENELSVLDAKTLLSNGCKCVAEGANMPSSNEAIGLFLQAKISYGIGKAANAGGVSVSGLEMAQNASMHPWSFEVVD AKLHHIMKEIYKNVSQTAKEFKDPTNFVLGANIAGFRKVASAMIAQGV >Mature_448_residues MYVEKILQSLQKKYPYQKEFHQAVYEAITSLKPLLDSDKSYEKHAILERLIEPEREIFFRVCWLDDNNQIQVNRGCRVEF NSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDV PAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVA IYTIEKLLQIGAKPVTASDSNGMIYDKDGIDLELLKEIKEVRRGRIKEYALEKKSAEYTPTENYPKGGNAVWHVPCFAAF PSATENELSVLDAKTLLSNGCKCVAEGANMPSSNEAIGLFLQAKISYGIGKAANAGGVSVSGLEMAQNASMHPWSFEVVD AKLHHIMKEIYKNVSQTAKEFKDPTNFVLGANIAGFRKVASAMIAQGV
Specific function: Unknown
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
Organism=Homo sapiens, GI31377775, Length=337, Percent_Identity=30.2670623145401, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI4885281, Length=337, Percent_Identity=29.9703264094956, Blast_Score=132, Evalue=5e-31, Organism=Escherichia coli, GI1788059, Length=449, Percent_Identity=57.9064587973274, Blast_Score=506, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17544676, Length=338, Percent_Identity=27.810650887574, Blast_Score=115, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6319256, Length=454, Percent_Identity=48.2378854625551, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6324951, Length=452, Percent_Identity=48.2300884955752, Blast_Score=359, Evalue=1e-100, Organism=Drosophila melanogaster, GI45553475, Length=376, Percent_Identity=28.7234042553192, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI45549226, Length=407, Percent_Identity=27.2727272727273, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24649460, Length=324, Percent_Identity=28.3950617283951, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI24649283, Length=317, Percent_Identity=28.7066246056782, Blast_Score=109, Evalue=4e-24,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR014362 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.4 [H]
Molecular weight: Translated: 49380; Mature: 49380
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00074 GLFV_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVEKILQSLQKKYPYQKEFHQAVYEAITSLKPLLDSDKSYEKHAILERLIEPEREIFFR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEE VCWLDDNNQIQVNRGCRVEFNSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAM EEEECCCCEEEECCCCEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEE GGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH KLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVA HHHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEE IYTIEKLLQIGAKPVTASDSNGMIYDKDGIDLELLKEIKEVRRGRIKEYALEKKSAEYTP EEEHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TENYPKGGNAVWHVPCFAAFPSATENELSVLDAKTLLSNGCKCVAEGANMPSSNEAIGLF CCCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEE LQAKISYGIGKAANAGGVSVSGLEMAQNASMHPWSFEVVDAKLHHIMKEIYKNVSQTAKE EEEEEHHCCCCCCCCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKDPTNFVLGANIAGFRKVASAMIAQGV HCCCCCEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MYVEKILQSLQKKYPYQKEFHQAVYEAITSLKPLLDSDKSYEKHAILERLIEPEREIFFR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEE VCWLDDNNQIQVNRGCRVEFNSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAM EEEECCCCEEEECCCCEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHEEE GGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH KLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVA HHHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEE IYTIEKLLQIGAKPVTASDSNGMIYDKDGIDLELLKEIKEVRRGRIKEYALEKKSAEYTP EEEHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TENYPKGGNAVWHVPCFAAFPSATENELSVLDAKTLLSNGCKCVAEGANMPSSNEAIGLF CCCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEE LQAKISYGIGKAANAGGVSVSGLEMAQNASMHPWSFEVVDAKLHHIMKEIYKNVSQTAKE EEEEEHHCCCCCCCCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKDPTNFVLGANIAGFRKVASAMIAQGV HCCCCCEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]