| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645009
GI number: 15645009
Start: 391537
End: 392367
Strand: Reverse
Name: Not Available
Synonym: HP0381
Alternate gene names: 15645009
Gene position: 392367-391537 (Counterclockwise)
Preceding gene: 15645010
Following gene: 15645008
Centisome position: 23.53
GC content: 38.63
Gene sequence:
>831_bases ATGACCCTTTCGCAAGCCCTAAACAAAGCCAAAAAAGGATTATCGCAAAAAGGTTTTAGGGGGGGCTTAGAATCTGAAAT TTTATTAGGCTTTGTCTTGCAAAAAGAAAGGGTTTTTTTGCACACGCATGCCTATTTAGAGTTAAACCACGAAGAAGAGG TGCGTTTTTTTGAATTGGTAGAAAAGCGCTTGAATAACTGCCCCATAGAGTATTTATTAGAAAGCTGTGATTTTTATGGG CGCTCTTTTTTTGTGAATGAGCATGTTTTAATCCCACGACCTGAAACCGAGATTTTGGTCCAAAAAGCCCTTGATATTAT TTCTCAATACCATTTAAAAGAGATAGGCGAAATCGGCATAGGGAGCGGATGCGTGTCTGTGAGTTTGGCTTTAGAAAACC CTAATCTCTCTATTTATGCGAGCGATATTTCACCAAACGCTTTAGAAGTGGCGTCCAAAAATATTGAGCACTTTTGTCTA AAAGAGCGTGTTTTTTTAAAACAAACACGCCTTTGGGATCATATGCCCATGATAGAAATGCTTGTCTCTAACCCGCCCTA TATCGCTAGAAATTATCCTTTGGAAAAATCCGTCCTCAAAGAACCGCATGAAGCCCTTTTTGGGGGGGTTAAAGGCGATG AGATCTTAAAAGAAATCGTTTTTTTAGCCGCTAAATTAAAAATCCCTTTTTTGGTTTGTGAAATGGGGTATGACCAGTTG AAAAGCTTGAAAGAATGCTTGGAATTTTGCGGTTATGATGCAGAGTTTTACAAGGATTTGAGCGGCTTTGATAGAGGGTT TGTGGGCGTTTTAAAAAGTTTTTTAAGATAA
Upstream 100 bases:
>100_bases AGAATAAAGCGTTCCCCTATTCGCACCCTTTTTATGTTTTCTTGCATTTCACGCACCCGCCCTTATTAGAGCGCTTGAAA GCTTTGGATTATGAAATTGA
Downstream 100 bases:
>100_bases ATTAAAACTTAATTACCCTTTTAGTGTTACAATAAAAACACTTAAAACAATAAAGGATGCCGCTCATGTATGTTGAAAAA ATTCTCCAGTCTTTACAGAA
Product: protoporphyrinogen oxidase (hemK)
Products: NA
Alternate protein names: M.AaoHemKP [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTLSQALNKAKKGLSQKGFRGGLESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELVEKRLNNCPIEYLLESCDFYG RSFFVNEHVLIPRPETEILVQKALDIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCL KERVFLKQTRLWDHMPMIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQL KSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR
Sequences:
>Translated_276_residues MTLSQALNKAKKGLSQKGFRGGLESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELVEKRLNNCPIEYLLESCDFYG RSFFVNEHVLIPRPETEILVQKALDIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCL KERVFLKQTRLWDHMPMIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQL KSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR >Mature_275_residues TLSQALNKAKKGLSQKGFRGGLESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELVEKRLNNCPIEYLLESCDFYGR SFFVNEHVLIPRPETEILVQKALDIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCLK ERVFLKQTRLWDHMPMIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQLK SLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=187, Percent_Identity=32.620320855615, Blast_Score=83, Evalue=3e-16, Organism=Escherichia coli, GI1787463, Length=256, Percent_Identity=30.078125, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87082085, Length=197, Percent_Identity=32.994923857868, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 31544; Mature: 31413
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSQALNKAKKGLSQKGFRGGLESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELV CCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCEEEEEEEEEEEECCHHHHHHHHHH EKRLNNCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDIISQYHLKEIGEIGI HHHHCCCCHHHHHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCLKERVFLKQTRLWDHMPMIEM CCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQL HHCCCCCEECCCCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEECCCHHHH KSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHC >Mature Secondary Structure TLSQALNKAKKGLSQKGFRGGLESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELV CHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHCEEEEEEEEEEEECCHHHHHHHHHH EKRLNNCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDIISQYHLKEIGEIGI HHHHCCCCHHHHHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCLKERVFLKQTRLWDHMPMIEM CCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQL HHCCCCCEECCCCCCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHEECCCHHHH KSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]