Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644889

GI number: 15644889

Start: 270525

End: 270923

Strand: Reverse

Name: Not Available

Synonym: HP0261

Alternate gene names: NA

Gene position: 270923-270525 (Counterclockwise)

Preceding gene: 15644909

Following gene: 15644888

Centisome position: 16.24

GC content: 28.32

Gene sequence:

>399_bases
ATGCAATTTTTAAATCAATCTTTAGGATTTTTTAATAAGGGTTGCTTTGAACCTATTGATAGAAACTTCATTACAGAAAG
CTATCAGGCATTAAAGCCGATTGAAGAAATTCAAAATAAATACAATAAACATGACAACGATTCATTTTTGAATGAATTGA
GAGACAGCATGGTGGCTCTATATTTAGATTATGAGCTTATCAATATTCAAAAGCATGGTCTTGATGCTAAAAGAAGTTCA
AGCGATGAATTTTTAGAAATCAAACAAGTATCCTTTCAAAGTCAATTAATCAAAGAATTTGAATTTAAAATGAAACCCAT
TGATTCAAAAGAACAAGAGCTTATCAATCTTTTTAATCTCAAGTTTGGTCATTTTTCTTGGGAAAATTATCTTGCATAA

Upstream 100 bases:

>100_bases
AATGAAATTTAAATTTTAGATATTCTGCTTAAAAGTATTGCTAATGAATCATATATTTTCACTAAAATAATATTGAAAGA
ATTTAATCAAAGGGCTAGAC

Downstream 100 bases:

>100_bases
AGTTTTTATCATGGAAGCTTTGGAGTGTTTGAAAAGGATAGAAAAAGAAAGCATCCAAACGATCTATATAGACCCCCCTT
ATAACACTAAGAGTTCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQFLNQSLGFFNKGCFEPIDRNFITESYQALKPIEEIQNKYNKHDNDSFLNELRDSMVALYLDYELINIQKHGLDAKRSS
SDEFLEIKQVSFQSQLIKEFEFKMKPIDSKEQELINLFNLKFGHFSWENYLA

Sequences:

>Translated_132_residues
MQFLNQSLGFFNKGCFEPIDRNFITESYQALKPIEEIQNKYNKHDNDSFLNELRDSMVALYLDYELINIQKHGLDAKRSS
SDEFLEIKQVSFQSQLIKEFEFKMKPIDSKEQELINLFNLKFGHFSWENYLA
>Mature_132_residues
MQFLNQSLGFFNKGCFEPIDRNFITESYQALKPIEEIQNKYNKHDNDSFLNELRDSMVALYLDYELINIQKHGLDAKRSS
SDEFLEIKQVSFQSQLIKEFEFKMKPIDSKEQELINLFNLKFGHFSWENYLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15746; Mature: 15746

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLNQSLGFFNKGCFEPIDRNFITESYQALKPIEEIQNKYNKHDNDSFLNELRDSMVAL
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YLDYELINIQKHGLDAKRSSSDEFLEIKQVSFQSQLIKEFEFKMKPIDSKEQELINLFNL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KFGHFSWENYLA
HCCCCCHHHHCC
>Mature Secondary Structure
MQFLNQSLGFFNKGCFEPIDRNFITESYQALKPIEEIQNKYNKHDNDSFLNELRDSMVAL
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YLDYELINIQKHGLDAKRSSSDEFLEIKQVSFQSQLIKEFEFKMKPIDSKEQELINLFNL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KFGHFSWENYLA
HCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA