| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644888
GI number: 15644888
Start: 269378
End: 270532
Strand: Reverse
Name: Not Available
Synonym: HP0260
Alternate gene names: 15644888
Gene position: 270532-269378 (Counterclockwise)
Preceding gene: 15644889
Following gene: 15644879
Centisome position: 16.22
GC content: 32.21
Gene sequence:
>1155_bases TTGCATAAAGTTTTTATCATGGAAGCTTTGGAGTGTTTGAAAAGGATAGAAAAAGAAAGCATCCAAACGATCTATATAGA CCCCCCTTATAACACTAAGAGTTCTAACTTTGAATATGAAGACGATCATGCTGACTATGAAAAATGGATTAAAGAACATT TGATTTTAGCAAAAGCTGTGTTAAAACAAAGCGGTTGTCTTTTTATTTCTATGGACGATAACAAAATGGCTGAAGTTAAA ATCATTGCCAATGAGATTTTTGGAACGCGCAATTTTTTAGGCACTTTTATCACTAAACAAGCCACAAGATCTAACGCTAA ACACATCAATATTACTCATGAATATGTTTTAAGCTACGCTAAAAATAAAGCGTTCGCTCCTGGTTTTAAAATCTTACGAA CGCTTTTGCCCATTTATGCTAGAGCATTAAAAGATTTAATGCGAACGATTAAGAATGTTTTCAAACAAAAAGGACAAGCT CAAGCCCAACTTGTCTTAAAAGAACAAATCAAAGAGTTATCCCAAAAAGAACATTTTAATTTTTTAAAAAATTATAATTT AGTGGATGAAAAAGGTGAGATTTATTTCGCTAAAGATTTATCCACGCCTTCAAACCCACGCAGTGTAGCGATAGAAGAAA TCAATCTTTTTTTAGAACCCTTAAAAAGCAGAGGGTGGAGCAGCGATGAAAAGCTTAAGGAGTTATATTATCAAAACAGA CTTATTTTTAAGAATAATCGCCCTTATGAAAAATATTACCTAAAAGAATCGCAAGATAATTGTTTGAGCGTGTTGGATTT TTATAGCCGACAAGGCACAAAAGATTTAGAAAAATTAGGCTTAAAGGGGCTTTTTAAGACGCCAAAACCTGTAGCATTGA TTAAATATTTATTGCTATGCTCCACCCCCAAAGATTCTATTATTTTAGATTTTTTTGCAGGCAGCGGGACAACAGCGCAA GCGGTTATAGAAGTTAATAGGGATTATTGTTTGAATTGGTCTTTTTATTTGTGTCAAAAAGAAGAAAAAATTAAAAATAA CCCGCAAGCTGTTAGTATTTTAAAAAATAAGGGGTATCAAAACACGATTTCAAACATCATGCTATTGCGTTTAGAAAAGA TCATTAAAAGAAGTGAATACGAAATTTTAAGATAA
Upstream 100 bases:
>100_bases AAAGAATTTGAATTTAAAATGAAACCCATTGATTCAAAAGAACAAGAGCTTATCAATCTTTTTAATCTCAAGTTTGGTCA TTTTTCTTGGGAAAATTATC
Downstream 100 bases:
>100_bases AACAAATAGCGTTTTAAATATTATTTTTCAAACCCCTACACCCTATCCACGCTCAAAATTTCAGCGCTCGCTCTGGTTTT TTCATTACTTAATTCAATTT
Product: adenine specific DNA methyltransferase
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWIKEHLILAKAVLKQSGCLFISMDDNKMAEVK IIANEIFGTRNFLGTFITKQATRSNAKHINITHEYVLSYAKNKAFAPGFKILRTLLPIYARALKDLMRTIKNVFKQKGQA QAQLVLKEQIKELSQKEHFNFLKNYNLVDEKGEIYFAKDLSTPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNR LIFKNNRPYEKYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLCSTPKDSIILDFFAGSGTTAQ AVIEVNRDYCLNWSFYLCQKEEKIKNNPQAVSILKNKGYQNTISNIMLLRLEKIIKRSEYEILR
Sequences:
>Translated_384_residues MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWIKEHLILAKAVLKQSGCLFISMDDNKMAEVK IIANEIFGTRNFLGTFITKQATRSNAKHINITHEYVLSYAKNKAFAPGFKILRTLLPIYARALKDLMRTIKNVFKQKGQA QAQLVLKEQIKELSQKEHFNFLKNYNLVDEKGEIYFAKDLSTPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNR LIFKNNRPYEKYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLCSTPKDSIILDFFAGSGTTAQ AVIEVNRDYCLNWSFYLCQKEEKIKNNPQAVSILKNKGYQNTISNIMLLRLEKIIKRSEYEILR >Mature_384_residues MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWIKEHLILAKAVLKQSGCLFISMDDNKMAEVK IIANEIFGTRNFLGTFITKQATRSNAKHINITHEYVLSYAKNKAFAPGFKILRTLLPIYARALKDLMRTIKNVFKQKGQA QAQLVLKEQIKELSQKEHFNFLKNYNLVDEKGEIYFAKDLSTPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNR LIFKNNRPYEKYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLCSTPKDSIILDFFAGSGTTAQ AVIEVNRDYCLNWSFYLCQKEEKIKNNPQAVSILKNKGYQNTISNIMLLRLEKIIKRSEYEILR
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 44774; Mature: 44774
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWIKEHLILAKAV CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKQSGCLFISMDDNKMAEVKIIANEIFGTRNFLGTFITKQATRSNAKHINITHEYVLSYA HHHCCEEEEEECCCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH KNKAFAPGFKILRTLLPIYARALKDLMRTIKNVFKQKGQAQAQLVLKEQIKELSQKEHFN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FLKNYNLVDEKGEIYFAKDLSTPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNR HHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC LIFKNNRPYEKYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLC EEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH STPKDSIILDFFAGSGTTAQAVIEVNRDYCLNWSFYLCQKEEKIKNNPQAVSILKNKGYQ CCCCCCEEEEEECCCCCCEEEEEEECCCEEECCEEEEECCHHHHCCCCHHHHHHHCCCCH NTISNIMLLRLEKIIKRSEYEILR HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWIKEHLILAKAV CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKQSGCLFISMDDNKMAEVKIIANEIFGTRNFLGTFITKQATRSNAKHINITHEYVLSYA HHHCCEEEEEECCCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH KNKAFAPGFKILRTLLPIYARALKDLMRTIKNVFKQKGQAQAQLVLKEQIKELSQKEHFN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FLKNYNLVDEKGEIYFAKDLSTPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNR HHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC LIFKNNRPYEKYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLC EEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHH STPKDSIILDFFAGSGTTAQAVIEVNRDYCLNWSFYLCQKEEKIKNNPQAVSILKNKGYQ CCCCCCEEEEEECCCCCCEEEEEEECCCEEECCEEEEECCHHHHCCCCHHHHHHHCCCCH NTISNIMLLRLEKIIKRSEYEILR HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]