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Identifier: 15644879

GI number: 15644879

Start: 260361

End: 261377

Strand: Reverse

Name: Not Available

Synonym: HP0251

Alternate gene names: 15644879

Gene position: 261377-260361 (Counterclockwise)

Preceding gene: 15644888

Following gene: 15644878

Centisome position: 15.67

GC content: 42.58

Gene sequence:

>1017_bases
GTGAGCAGTTTGTTTAAAATGCGCATTCTTAGTTTTAAAAAGAATAAGCGGGCGGTGTTTTCACTCTATCTTTTTATCGC
TTTATTAGCACTTTCTCTTTTAGCCCCCTTGTGGGTGAATGATCGACCTTTATTCATCTATAAAGACAATAAAGCGTATT
TCCCCATGTTTAAAAATTATGCGGAAGTGGAGTTTGGAGGCGATTTTTTCACCCCTACGGATTATAACGATCCTTATGTG
CAAAACACGCTTTTAAAAGACGCTTTCATTATCCATGCGCTCATCCCTTATAGCTACGATACGATCATTATGGATTTAGA
CTCGCCTGCCCCCACCCCCCCAAGCTTCAAACACCTTTTAGGCACAGACGATCAAGCCAGAGACGTGTTAGCCAGGCTGG
TTTATGGCTATCGGGTTTCGTTAATATTTGGGATTTTACTCACCCTTTTTAGCGTTCTTATTGGCGTGAGTTTGGGAGCG
TTTCAGGGGTATTATGGAGGGTTAGTAGATTTAGTGGGGCAAAGGTTGAGCGAGATTTGGAGCGCGATCCCTATGCTTTT
TTTACTCATTGTGATTTCTAGCGCGTTTAATTCTAATTTCTGGATCATTTTATTTTTAGTCTTGCTCTTTAGCTGGATGG
GGCTTTCTCAAGTCGTGCGCACGGAGTTTTTAAAAGCAAGGAATATGGACTACACCAAAGCCGCTAGAGCGCTTGGGGTG
AATGATTTAAAAATCATTTTCTACCATGTTTTACCCAACGCTTTAGTAGCGACGATCACTTATGTGCCGTTTTTAATGGC
GGCCAGTATTTCTACTTTAGTGTCTTTGGATTTTTTGGGTTTTGGCATGCCCATAGGGAGCGCGAGTTTGGGCGAATTGG
TCAATCAAGGGAAAGATAATCTCACCACGCCCCATTTAGCCATCGTTGCGTTTGTAGCCATTAGCTTGTTGCTTTCTGTT
TTGGTGTTCATTGGCGAAGGGGTGCGCGATGCTTTCAACGCTAACATGCTCAAATAA

Upstream 100 bases:

>100_bases
GCTTATTCTCTTTCTTTATGGATCAAACCCGTTTTCTTGCTAGTATTACCCATAATTAATTATAATCTCAGGAATTGTTT
TTCATCAAGGGAGTTTGAGC

Downstream 100 bases:

>100_bases
GGGGGTTATATGCTAGAAATCAAAAACTTGAACTGCGTTTTAAACGCGCATTTTTCGCTCCAAAACATCAATATTTCGTT
AAATCCTAGCGAAAGGGTGG

Product: oligopeptide ABC transporter permease protein (oppC)

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDPYV
QNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLIFGILLTLFSVLIGVSLGA
FQGYYGGLVDLVGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARALGV
NDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLLSV
LVFIGEGVRDAFNANMLK

Sequences:

>Translated_338_residues
MSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDPYV
QNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLIFGILLTLFSVLIGVSLGA
FQGYYGGLVDLVGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARALGV
NDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLLSV
LVFIGEGVRDAFNANMLK
>Mature_337_residues
SSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNYAEVEFGGDFFTPTDYNDPYVQ
NTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLLGTDDQARDVLARLVYGYRVSLIFGILLTLFSVLIGVSLGAF
QGYYGGLVDLVGQRLSEIWSAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARALGVN
DLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDNLTTPHLAIVAFVAISLLLSVL
VFIGEGVRDAFNANMLK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=335, Percent_Identity=50.4477611940299, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1787054, Length=226, Percent_Identity=28.7610619469027, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787498, Length=304, Percent_Identity=29.2763157894737, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787760, Length=220, Percent_Identity=27.7272727272727, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789964, Length=231, Percent_Identity=35.0649350649351, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787549, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37729; Mature: 37598

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNY
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHCCC
AEVEFGGDFFTPTDYNDPYVQNTLLKDAFIIHALIPYSYDTIIMDLDSPAPTPPSFKHLL
CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH
GTDDQARDVLARLVYGYRVSLIFGILLTLFSVLIGVSLGAFQGYYGGLVDLVGQRLSEIW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIPMLFLLIVISSAFNSNFWIILFLVLLFSWMGLSQVVRTEFLKARNMDYTKAARALGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
NDLKIIFYHVLPNALVATITYVPFLMAASISTLVSLDFLGFGMPIGSASLGELVNQGKDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
LTTPHLAIVAFVAISLLLSVLVFIGEGVRDAFNANMLK
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure 
SSLFKMRILSFKKNKRAVFSLYLFIALLALSLLAPLWVNDRPLFIYKDNKAYFPMFKNY
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHCCC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CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]