Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644846

GI number: 15644846

Start: 227007

End: 227558

Strand: Reverse

Name: Not Available

Synonym: HP0218

Alternate gene names: 15644846

Gene position: 227558-227007 (Counterclockwise)

Preceding gene: 15644854

Following gene: 15644841

Centisome position: 13.64

GC content: 41.67

Gene sequence:

>552_bases
ATGAAAACTTTTGAAGTAATGATTCAAACCGATTCGAAAGGGTATTTGGACGCTAAATTTGGCGGTAACGCTCCTAAAGC
GTTTCTCAATTCAAACGGCTTACCCACTTATTCGCCTAAAATCTCATGGCAAAAAGTAGAAGGCGCTCAAAGCTATGCGT
TAGAACTCATCGATCATGACGCTCAAAAAGTGTGTGGCATGCCGTTTGTCCATTGGGTCGTGGGCAATATTGCTCATAAT
GTTTTAGAAGAAAACGCCTCCATGATGGATAAAAGGATTGTTCAAGGGGTCAATTCACTCACTCAAGGCTTTATCCGTTC
TCCTCTTAATGAAAGCGAAAAACAACGCTCCAATCTCAATAACAGCGTCTATATCGGCCCCATGCCCCCTAATGGCGATC
ACCATTATCTTATTCAAGTGTATGCCCTAGACATTCCTAAACTCGCCTTAAAAGCTCCTTTTTTCTTAGGCGATTTGCAT
GACAAAATGCGCAACCATATCATCGCCATAGGGAGAAAGGAATTTTTATACAAGCAGTTTGTGAGGAAATAG

Upstream 100 bases:

>100_bases
AAAATGATTATTCTAATACCATGCTTCAAATTAAGATGTATTTTTATGATCATGCTACAATAAGAGAACGCAAAACGATT
TCAAAAAAAAAGGGCTTAAA

Downstream 100 bases:

>100_bases
GTTGCATGCTTGCAGCTATCTTTCCGCTAAATTGAATTTTTGATACATCTCTAAAATTCTCTTTTCATCTAGCATGCTTT
CTTCAATCTTTGTGCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN
VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRNHIIAIGRKEFLYKQFVRK

Sequences:

>Translated_183_residues
MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN
VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRNHIIAIGRKEFLYKQFVRK
>Mature_183_residues
MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMPFVHWVVGNIAHN
VLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRNHIIAIGRKEFLYKQFVRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20690; Mature: 20690

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHD
CCCEEEEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH
AQKVCGMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLYKQF
CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHEEEECHHHHHHHHH
VRK
HCC
>Mature Secondary Structure
MKTFEVMIQTDSKGYLDAKFGGNAPKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHD
CCCEEEEEEECCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH
AQKVCGMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLYKQF
CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHEEEECHHHHHHHHH
VRK
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]