Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644854

GI number: 15644854

Start: 233929

End: 234762

Strand: Reverse

Name: Not Available

Synonym: HP0226

Alternate gene names: NA

Gene position: 234762-233929 (Counterclockwise)

Preceding gene: 15644855

Following gene: 15644846

Centisome position: 14.08

GC content: 43.05

Gene sequence:

>834_bases
ATGGAAGAATCAACAGCGTTTATTTTGGCTCTTGTGGGGCTATTCACCGGCATTACCGCCGGGTTTTTTGGTATTGGTGG
GGGGGAGATTGTCGTCCCTAGCGCGATTTTTGCCCATTTTAGCTATAGCCATGCGGTGGGTATTTCGCTCATGCAAATGC
TTTTTTCTTCAGTGGTCGGCTCTATCATCAATTACAAAAAGGGCTTATTGGATTTGAGAGAAGGCTCATTTGCCGCGCTT
GGAGGGCTAATGGGAGCGATTTTAGGGAGCTTTATCTTAAAAATCATTGACGATAAAATTTTAATGGCGGTGTTTGTGGT
GGTGGTGTGCTACACCTTTATCAAATACGCTTTTTCTAGCAACAAGAAACCCAAGCATTTTGAAGAAATGCATTTTGATT
TGCATGCGAATAACAAAACGCCCGAAAAAAAGCGCGCAATCCCTTTTGTGTCTATGGATAGAACGCATGGGGTTTTGATG
CTCGCCGGTTTTGTTACCGGCATCTTTTCTATCCCACTAGGCATGGGTGGAGGGATTTTAATGGTGCCGTTTTTGGGCTA
TTTTTTGAAATACGATTCTAAAAAAATCGTGCCTTTGGGGCTATTTTTTGTGGTGTTCGCTTCTTTATCTGGGGTCATCT
CTCTTTATAACGGGAGGGTTCTTGATAATATAAGCGTTCAAGCGGGGGTGATTACCGGCATTGGAGCGTTTTTAGGCGTG
GGCATTGGCATCAAGCTTATCGCTTTGGCTAATGAAAAGGTGCATAAAATCCTGTTGCTCCTTATTTATGCTTTAAGCAT
TTTAGCGACTTTACACAAGCTCATTATGGGGTAA

Upstream 100 bases:

>100_bases
AAGTGATCAAAACCCTATTTTTTAAAATTAAAGAAAATTTTTTTTAAAGATTATCACTCTTTTTTGATAAAGTAATCATT
TAAAATTTAGGGAGTTTTTT

Downstream 100 bases:

>100_bases
ATCTAAAAACGCTTCTAGGGCATTTTTAAAATTAATATCAAAGAGCTTTCACCAGCAAGCGATAATCTCTAAAAAAGCAC
TTCTTTAGGGTTAGGGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Protein OxaA; Integral Membrane Protein- Permeases

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MEESTAFILALVGLFTGITAGFFGIGGGEIVVPSAIFAHFSYSHAVGISLMQMLFSSVVGSIINYKKGLLDLREGSFAAL
GGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFSSNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLM
LAGFVTGIFSIPLGMGGGILMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVISLYNGRVLDNISVQAGVITGIGAFLGV
GIGIKLIALANEKVHKILLLLIYALSILATLHKLIMG

Sequences:

>Translated_277_residues
MEESTAFILALVGLFTGITAGFFGIGGGEIVVPSAIFAHFSYSHAVGISLMQMLFSSVVGSIINYKKGLLDLREGSFAAL
GGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFSSNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLM
LAGFVTGIFSIPLGMGGGILMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVISLYNGRVLDNISVQAGVITGIGAFLGV
GIGIKLIALANEKVHKILLLLIYALSILATLHKLIMG
>Mature_277_residues
MEESTAFILALVGLFTGITAGFFGIGGGEIVVPSAIFAHFSYSHAVGISLMQMLFSSVVGSIINYKKGLLDLREGSFAAL
GGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFSSNKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLM
LAGFVTGIFSIPLGMGGGILMVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVISLYNGRVLDNISVQAGVITGIGAFLGV
GIGIKLIALANEKVHKILLLLIYALSILATLHKLIMG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29732; Mature: 29732

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESTAFILALVGLFTGITAGFFGIGGGEIVVPSAIFAHFSYSHAVGISLMQMLFSSVVG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIINYKKGLLDLREGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFSS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGIL
CCCCCHHHHHHHEEECCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHH
MVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVISLYNGRVLDNISVQAGVITGIGAFLGV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
GIGIKLIALANEKVHKILLLLIYALSILATLHKLIMG
HHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEESTAFILALVGLFTGITAGFFGIGGGEIVVPSAIFAHFSYSHAVGISLMQMLFSSVVG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIINYKKGLLDLREGSFAALGGLMGAILGSFILKIIDDKILMAVFVVVVCYTFIKYAFSS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NKKPKHFEEMHFDLHANNKTPEKKRAIPFVSMDRTHGVLMLAGFVTGIFSIPLGMGGGIL
CCCCCHHHHHHHEEECCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHH
MVPFLGYFLKYDSKKIVPLGLFFVVFASLSGVISLYNGRVLDNISVQAGVITGIGAFLGV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
GIGIKLIALANEKVHKILLLLIYALSILATLHKLIMG
HHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA