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Identifier: 15644822

GI number: 15644822

Start: 200010

End: 200777

Strand: Reverse

Name: Not Available

Synonym: HP0193

Alternate gene names: 15644822

Gene position: 200777-200010 (Counterclockwise)

Preceding gene: 15644833

Following gene: 15644821

Centisome position: 12.04

GC content: 39.45

Gene sequence:

>768_bases
ATGCAACAAGAAGAGATTATAGAGGGTTATTATGGTGCTAGCAAAGGGCTTAAAAAGAGCGGTATTTATGCCAAGCTGGA
TTTTTTACAGAGCGCTACGGGCTTGATTTTAGCGCTCTTTATGATAGCACACATGTTTTTAGTCTCAAGTATCTTGATTA
GCGATGAAGCCATGTATAAAGTGGCGAAATTTTTTGAAGGGAGCTTGTTTTTAAAAGCGGGCGAGCCGGCTATTGTGAGC
GTGGTTGCAGCAGGGATTATTCTTATTTTAGTCGCGCATGCTTTTTTGGCGTTAAGGAAATTCCCTATCAATTACAGGCA
ATACAAGGTTTTTAAAACCCATAAGCATTTGATGAAACATGGCGATACGAGCTTGTGGTTTATTCAAGCCCTCACCGGGT
TTGCGATGTTTTTCTTAGCGAGTATCCACTTATTTGTCATGCTCACAGAGCCTGAAAGTATTGGGCCTCATGGTTCAAGC
TATCGTTTTGTAACGCAAAACTTTTGGCTTTTGTATATTTTCTTATTGTTTGCCGTAGAATTGCATGGCTCTATTGGGTT
GTATCGTTTAGCGATCAAATGGGGGTGGTTTAAAAATGTGAGCATTCAAGGTTTGAGAAAAGTCAAATGGGCGATGAGCG
TGTTTTTTATTGTTTTAGGGCTTTGCACCTATGGGGCTTACATTAAAAAAGGTTTAGAAAATAAGGAAAATGGCATTAAA
ACCATGCAAGAAGCCATAGAAGCTGATGGGAAATTCCACAAAGAATAA

Upstream 100 bases:

>100_bases
TTTGTTTATAAGAAAAATTATTTCAAATGTAGTAGAATTAAGGCAGTGTTTTTGCGTCAAGCGATTTTAGGTTAATTTTG
AGTTTTTAGGAGCAGTTTTT

Downstream 100 bases:

>100_bases
GGGTAGAAAATGAAAATAACATATTGTGATGCGCTAATTATTGGAGGCGGACTAGCTGGGTTAAGGGCTAGTATCGCATG
CAAACAAAAGGGTTTAAACA

Product: fumarate reductase cytochrome b-556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQQEEIIEGYYGASKGLKKSGIYAKLDFLQSATGLILALFMIAHMFLVSSILISDEAMYKVAKFFEGSLFLKAGEPAIVS
VVAAGIILILVAHAFLALRKFPINYRQYKVFKTHKHLMKHGDTSLWFIQALTGFAMFFLASIHLFVMLTEPESIGPHGSS
YRFVTQNFWLLYIFLLFAVELHGSIGLYRLAIKWGWFKNVSIQGLRKVKWAMSVFFIVLGLCTYGAYIKKGLENKENGIK
TMQEAIEADGKFHKE

Sequences:

>Translated_255_residues
MQQEEIIEGYYGASKGLKKSGIYAKLDFLQSATGLILALFMIAHMFLVSSILISDEAMYKVAKFFEGSLFLKAGEPAIVS
VVAAGIILILVAHAFLALRKFPINYRQYKVFKTHKHLMKHGDTSLWFIQALTGFAMFFLASIHLFVMLTEPESIGPHGSS
YRFVTQNFWLLYIFLLFAVELHGSIGLYRLAIKWGWFKNVSIQGLRKVKWAMSVFFIVLGLCTYGAYIKKGLENKENGIK
TMQEAIEADGKFHKE
>Mature_255_residues
MQQEEIIEGYYGASKGLKKSGIYAKLDFLQSATGLILALFMIAHMFLVSSILISDEAMYKVAKFFEGSLFLKAGEPAIVS
VVAAGIILILVAHAFLALRKFPINYRQYKVFKTHKHLMKHGDTSLWFIQALTGFAMFFLASIHLFVMLTEPESIGPHGSS
YRFVTQNFWLLYIFLLFAVELHGSIGLYRLAIKWGWFKNVSIQGLRKVKWAMSVFFIVLGLCTYGAYIKKGLENKENGIK
TMQEAIEADGKFHKE

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 28887; Mature: 28887

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEEIIEGYYGASKGLKKSGIYAKLDFLQSATGLILALFMIAHMFLVSSILISDEAMYK
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKFFEGSLFLKAGEPAIVSVVAAGIILILVAHAFLALRKFPINYRQYKVFKTHKHLMKH
HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDTSLWFIQALTGFAMFFLASIHLFVMLTEPESIGPHGSSYRFVTQNFWLLYIFLLFAVE
CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
LHGSIGLYRLAIKWGWFKNVSIQGLRKVKWAMSVFFIVLGLCTYGAYIKKGLENKENGIK
HCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TMQEAIEADGKFHKE
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MQQEEIIEGYYGASKGLKKSGIYAKLDFLQSATGLILALFMIAHMFLVSSILISDEAMYK
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKFFEGSLFLKAGEPAIVSVVAAGIILILVAHAFLALRKFPINYRQYKVFKTHKHLMKH
HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GDTSLWFIQALTGFAMFFLASIHLFVMLTEPESIGPHGSSYRFVTQNFWLLYIFLLFAVE
CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
LHGSIGLYRLAIKWGWFKNVSIQGLRKVKWAMSVFFIVLGLCTYGAYIKKGLENKENGIK
HCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TMQEAIEADGKFHKE
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]