| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644793
GI number: 15644793
Start: 172470
End: 173234
Strand: Reverse
Name: Not Available
Synonym: HP0164
Alternate gene names: 15644793
Gene position: 173234-172470 (Counterclockwise)
Preceding gene: 15644794
Following gene: 15644792
Centisome position: 10.39
GC content: 36.6
Gene sequence:
>765_bases GTGAGTTGTAAAAGCAAGCAAAAAGATGAAATAGGGGATCTGGCTAACGAATTTGACAATTGCATTCTAAAAATCAATGC GATGAATGAATCTCGGGTTTTATTTTTGCGCTCTATCATGCATGAACTGCGCACCCCTATCACTAAGGGCAAGATACTAA GCTCTATGCTCAAAGAAGAGCTGTCTTGCAAACGCTTTTCATCTATATTTGACCACTTGAACATGCTGATTGAGCAATTT GCCCGCATTGAGCAGCTCGCTTCCAAAAATTATGGGAGCAATAAAGAAAAATTTTTAATGAGCGATTTGATAGACAAGAT TGAAAAAATGCTTTTAATTGATGAGGATAAAGAAAGCCCTATCCATGTATCCTCTTCCAATTACATTATTGAAGCGGATT TTGAATTGTTTTCCATAGCGTTAAAAAACATGGTAGATAATGCGATTAAATACAGCGATGACAAACAGGTGTTTTTGGAT TTCATAGGCAATAATTTAGTGGTGTCCAATAAAAGCAAACCTTTAAAAGAAGATTTTGAAAAGTATTTGCAACCCTACTT TAAATCTTCTAACCCCAGCCAAGCCCATGGTTTTGGGCTAGGCATGTATATCATTAAAAACGCTTTAGAGGCTATGGGAT TGAATTTGAGCTATCATTACAGCAATGGAAGAATTTGTTTCACTATCCATGATTGCGTTTTTAATAGTTTTTACGATTTA GAAGAGGATAATGAAGAGCTACCCCCCCCCCCCCCGAAAATTTGA
Upstream 100 bases:
>100_bases TGTTATTGATTTTATTCCTCTTTTTATTTGTTTTGCAGAGTTTATTGCCCTTAAGAGAGTTAAGATCTCAAGTGAAACCT TCGCTCAAGGGGATAAAAGC
Downstream 100 bases:
>100_bases GAGAAGTGAGCGGAATGAAGGGGATAGAAAAAGCCAATTGTGGGGTTAAAGAAAAACAATAAAGAGAGAACATGTTCAAA CGATTGAGAAGATTACGAAG
Product: signal-transducing protein, histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Histidine Kinase; Two-Component System Histidine Kinase; Histidine Kinase Sensor Protein; Two-Component Sensor; Histidine Kinase HAMP Region Domain Protein; Sensor Histidine Kinase SrrB; Two-Component Histidine Kinase Sensor Protein; Putative Two-Component Sensor; Sensor Protein CssS; HAMP Domain-Containing Protein; Histidine Kinase A Domain Protein; Sensory Histidine Protein Kinase; Sensory Transduction Histidine Kinase; Phytochrome B; Proline Permease; Two-Component System Protein Histidine Kinase
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSCKSKQKDEIGDLANEFDNCILKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQF ARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKESPIHVSSSNYIIEADFELFSIALKNMVDNAIKYSDDKQVFLD FIGNNLVVSNKSKPLKEDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDL EEDNEELPPPPPKI
Sequences:
>Translated_254_residues MSCKSKQKDEIGDLANEFDNCILKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQF ARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKESPIHVSSSNYIIEADFELFSIALKNMVDNAIKYSDDKQVFLD FIGNNLVVSNKSKPLKEDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDL EEDNEELPPPPPKI >Mature_253_residues SCKSKQKDEIGDLANEFDNCILKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQFA RIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKESPIHVSSSNYIIEADFELFSIALKNMVDNAIKYSDDKQVFLDF IGNNLVVSNKSKPLKEDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLE EDNEELPPPPPKI
Specific function: This Protein Is Involved In Several Diverse Cellular Processes, Such As The Functioning Of Acetohydroxyacid Synthetase I, In The Biosynthesis Of Isoleucine And Valine, The Traj Protein Activation Activity For Tra Gene Expression In F Plasmid, And The Syn
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.-
Molecular weight: Translated: 29225; Mature: 29094
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCKSKQKDEIGDLANEFDNCILKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEE CCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKESP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC IHVSSSNYIIEADFELFSIALKNMVDNAIKYSDDKQVFLDFIGNNLVVSNKSKPLKEDFE EEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHHHH KYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHCCC EEDNEELPPPPPKI CCCCCCCCCCCCCC >Mature Secondary Structure SCKSKQKDEIGDLANEFDNCILKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEE CCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKESP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC IHVSSSNYIIEADFELFSIALKNMVDNAIKYSDDKQVFLDFIGNNLVVSNKSKPLKEDFE EEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHHHH KYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHCCC EEDNEELPPPPPKI CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA