| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644749
GI number: 15644749
Start: 129383
End: 130768
Strand: Reverse
Name: Not Available
Synonym: HP0119
Alternate gene names: NA
Gene position: 130768-129383 (Counterclockwise)
Preceding gene: 15644750
Following gene: 15644748
Centisome position: 7.84
GC content: 32.9
Gene sequence:
>1386_bases ATGCCTGTTATAAGAGTTTTAGTAATGCTTGCAACAATGATGATGAAATTAGTAAAAACGGCAAAAGAAAAGAAAGTTTT TAAGAATGTGGGAATGTCTATAATGGGGATTGCTTTTTGGGAGGCGATAAAAGACTCAATAAAAAAACAAATTAAAAAAA GCAATTGGATATGCGGGAATGTTAAGACTGCGGATGATTATTTAAAAACGCATCCTAACTCATGGTTTAATTCAGCAATA GGTGTAACAACGATAACAGCCATGCTTATGAATGTGTGTTTTGCTGATGACCAATCCAAAAAAGAAGTGGCTGAAACTCA AAAGGAAGCTGAAAACGCTAGGGATAGAGCAAACAAGAGTGGGATAGAATTGGAACAAGAACAACAAAAGACAGAACAAG AAAAACAAAAGACAGAACAAGAAAAACAAAAGACAGAACAAGAAAAACAAAAGACAAGCAATATAGAGACTAACAATCAA ATAAAAGTAGAACAAAAACAACAAAAGACAGAACAAGAAAAACAAAAGACAGAACAAGAAAAACAAAAGACAGAACAAGA AAAACAAAAGACAGAACAAGAAAAACAAAAGACAAGCAATATAGAGACTAACAATCAAATAAAAGTAGAACAAAAACAAC AAAAGACAGAACAAGAAAAACAAAAGACAGAACAAGAAAAACAAAAGACAGAACAAGAAAAACAAAAGACAGAACAGGAA AAACAAAAGACAAGCAATATAGAGACTAACAATCAAATAAAAGTAGAACAAGAACAACAGAAGACAGAACAAGAAAAACA AAAGACAAACAATACGCAAAAAGATTTGGTTAAATACGCAGAACAAAATTGCCAAGAAAATCATAATCAATTCTTTATTA AAAAATTAGGAATTAAGGGTGGCATTGCTATAGAAGTAGAAGCTGAATGCAAAACCCCTAAACCTGCAAAAACCAATCAA ACCCCTATCCAGCCAAAACACCTCCCAAACTCTAAACAACCTCATTCTCAAAGAGGATCAAAAGCGCAAGAGTTTATCGC TTATTTGCAAAAAGAGCTAGAATTTCTGCCCTATTCGCAAAAAGCTATCGCTAAACAAGTGAATTTCTATAAACCAAGTT CTATCGCTTATTTAGAACTAGATCCTAGAGATTTTAAGGTTACAGAAGAATGGCAAAAAGAAAATCTAAAAATACGCTCT AAAGCTCAAGCTAAAATGCTTGAAATGAGGGATTTAAAACCAGACCCACAAGCCCACCTTCCAACCTCTCAAAGCCTTTT GTTCGTTCAAAAAATATTTGCTGATGTTAATAAAGAAATAGAAGCAGTTGCTAATACTGAAAAGAAAGCAGAAAAAGCGG GTTATGGTTATAGTAAAAGGATGTAG
Upstream 100 bases:
>100_bases ACAATTTTTCAAACCAATCGTTTAATAGCGATTAAATATGGCTATATATACTACAATAATAAGATTTTGAAAAGTGAGAT TGTTTTTTGAAAGGATTTAA
Downstream 100 bases:
>100_bases GCATAAGAAAATAAGAACACCATAAAATCGTTTTTAGCTTCTAGGAGACATCAGTCAGTTTCTTGCCATAGAAAAATCGC TTATTAGCTTGCTCCCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGMSIMGIAFWEAIKDSIKKQIKKSNWICGNVKTADDYLKTHPNSWFNSAI GVTTITAMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELEQEQQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQ IKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQE KQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVKYAEQNCQENHNQFFIKKLGIKGGIAIEVEAECKTPKPAKTNQ TPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRS KAQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM
Sequences:
>Translated_461_residues MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGMSIMGIAFWEAIKDSIKKQIKKSNWICGNVKTADDYLKTHPNSWFNSAI GVTTITAMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELEQEQQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQ IKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQE KQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVKYAEQNCQENHNQFFIKKLGIKGGIAIEVEAECKTPKPAKTNQ TPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRS KAQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM >Mature_460_residues PVIRVLVMLATMMMKLVKTAKEKKVFKNVGMSIMGIAFWEAIKDSIKKQIKKSNWICGNVKTADDYLKTHPNSWFNSAIG VTTITAMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELEQEQQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQI KVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQEK QKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVKYAEQNCQENHNQFFIKKLGIKGGIAIEVEAECKTPKPAKTNQT PIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSK AQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53650; Mature: 53519
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGMSIMGIAFWEAIKDSIKKQIKKSNWICGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VKTADDYLKTHPNSWFNSAIGVTTITAMLMNVCFADDQSKKEVAETQKEAENARDRANKS CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC GIELEQEQQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHH KQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQE HHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVKYAEQNCQENHNQFFIKKLGIKG HHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GIAIEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQ CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHH KAIAKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHL HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC PTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure PVIRVLVMLATMMMKLVKTAKEKKVFKNVGMSIMGIAFWEAIKDSIKKQIKKSNWICGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VKTADDYLKTHPNSWFNSAIGVTTITAMLMNVCFADDQSKKEVAETQKEAENARDRANKS CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC GIELEQEQQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHH KQKTEQEKQKTEQEKQKTSNIETNNQIKVEQKQQKTEQEKQKTEQEKQKTEQEKQKTEQE HHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVKYAEQNCQENHNQFFIKKLGIKG HHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GIAIEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQ CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHH KAIAKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHL HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC PTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA